Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 598 a.a., acyl-CoA dehydrogenase from Pseudomonas aeruginosa PA14

 Score =  515 bits (1327), Expect = e-150
 Identities = 285/600 (47%), Positives = 381/600 (63%), Gaps = 19/600 (3%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M  Y+APL DMRFL+++VFD    +  L   A     D   AIL+E +K   Q++ PLNR
Sbjct: 1   MPEYKAPLRDMRFLIDEVFDFHGRYQALG--ASDATPDMVAAILDEGSKFCEQVLAPLNR 58

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
           +GDE+G    +  V TP+G+K  Y QY +GGW G+  +P +GG G+P  LG+L+ EM  S
Sbjct: 59  SGDEEGCHFDNGVVTTPKGFKEAYAQYVEGGWNGVASDPAYGGQGLPHSLGLLLSEMIGS 118

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           +  ++ +Y  LT GA   I+AHGS+  K  YL ++ +G W G M +TEP  G+DL  I+T
Sbjct: 119 SNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTAGTWTGTMCLTEPHCGTDLGIIKT 178

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPE----SKGISLFLVPKITVNK 236
           RAVP  DGS+AISG+KIFI+ G+HDL+EN++HLVLAKLP+    +KGISLF+VPK   + 
Sbjct: 179 RAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPDAPAGTKGISLFIVPKFLPDA 238

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
           +G +G  N VS GSIEHKMG+K SATCVMNFD A GYLIGEPN+GL CMFTMMN+ RL  
Sbjct: 239 EGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYLIGEPNKGLHCMFTMMNHARLGT 298

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD--SDPIIVHGDVRRMLLTIRAMTE 354
           G+QGL   + +YQ A  YA+ER Q  +  G P   D  +DPIIVH DVRRMLLT++A  E
Sbjct: 299 GMQGLCLGETSYQGAVRYARERLQMRSLTG-PKAPDKPADPIIVHPDVRRMLLTMKAFNE 357

Query: 355 AGRALSVFTGKQLDLAKYAQDDV-KAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGG 413
             RAL+ FT + LD    +QD   + +AA  +  LTP+ KAF+T+ G + T +  QV+GG
Sbjct: 358 GNRALAYFTAQLLDTEHLSQDAAERERAADLLAFLTPICKAFMTETGQEVTNLGMQVYGG 417

Query: 414 HGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEF---VAELKAQM 470
           HGYIRE G+EQLVRD RIAQIYEGTNGIQA+D LGRKV G     L+ F   V +L    
Sbjct: 418 HGYIREWGMEQLVRDCRIAQIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKLVHQLCQAQ 477

Query: 471 REFTQVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYWL 530
            E  Q+ G ++A + A       + + V    +     + A +VD+L   GY    ++WL
Sbjct: 478 AEHPQLKG-QVAQLAALNAQWGELTQQVGLAAMKNADEVGAASVDYLMFSGYVTLAYFWL 536

Query: 531 AML----DKVPSAE-DQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585
            +     +K+ +   +  F E K   A FYF +LLP+   H A ++AG    M++ AE F
Sbjct: 537 RIALVAREKLDAGSGEAAFYEAKLATADFYFSRLLPRTAAHAAAIQAGAAGLMSLSAEQF 596