Pairwise Alignments

Query, 585 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Shewanella oneidensis MR-1

Subject, 593 a.a., acyl-CoA dehydrogenase from Pseudomonas aeruginosa PA14

 Score =  625 bits (1611), Expect = 0.0
 Identities = 329/594 (55%), Positives = 407/594 (68%), Gaps = 10/594 (1%)

Query: 1   MNPYQAPLADMRFLLEQVFDAPNTWSQLPDIAEMVDMDTANAILEEAAKISAQLIHPLNR 60
           M  Y APL DMRFLL  VFDAP  W +LP +AE +D DTA+AILEEAAK++  L+ PLNR
Sbjct: 1   MPEYNAPLRDMRFLLNDVFDAPALWQRLPRLAERIDADTADAILEEAAKVTGGLLAPLNR 60

Query: 61  AGDEQGVLHQDNCVITPEGYKAVYDQYSQGGWVGLCGEPEFGGMGMPKMLGVLVDEMAYS 120
           +GDE+G   QD  V TP G++  Y  Y++GGWVGL G P  GGMGMPKML V  +EM Y+
Sbjct: 61  SGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHGGMGMPKMLAVQFEEMMYA 120

Query: 121 ACNAFTLYGSLTAGAALCINAHGSEVLKQAYLPKLYSGEWAGAMDMTEPQAGSDLRNIRT 180
           A  +F+LY +L+AGA L ++AHGSE LK  YLP +Y+G WAG+M +TEP AG+DL  IRT
Sbjct: 121 ANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTWAGSMCLTEPHAGTDLGIIRT 180

Query: 181 RAVPQEDGSYAISGSKIFITGGDHDLTENVIHLVLAKLPE----SKGISLFLVPKITVNK 236
           +A PQ DGSY ISG+KIFITGG+ DLTEN+IHLVLAKLP+    S+GISLFLVPK  V  
Sbjct: 181 KAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKLPDAPAGSRGISLFLVPKFLVGD 240

Query: 237 DGCLGGTNGVSVGSIEHKMGLKGSATCVMNFDEAKGYLIGEPNRGLVCMFTMMNYERLAI 296
           DG LG  N V  GSIEHKMG+K SATCVMNFD A G+L+GE N+GL  MFTMMNYERL+I
Sbjct: 241 DGALGARNAVHCGSIEHKMGIKASATCVMNFDGASGWLVGEVNKGLAAMFTMMNYERLSI 300

Query: 297 GIQGLGSAQAAYQMATDYAKERSQGVAAGGSPTGSD--SDPIIVHGDVRRMLLTIRAMTE 354
           GIQG+G A+ +YQ A  YA+ER Q  A  G P   D  +DPIIVH DVRRMLLT++A+TE
Sbjct: 301 GIQGIGCAEMSYQSAVAYARERLQSRAPTG-PVARDKAADPIIVHPDVRRMLLTMKALTE 359

Query: 355 AGRALSVFTGKQLDLAKYAQD-DVKAKAARYVGLLTPVAKAFLTDRGLDATIMAQQVFGG 413
            GRA S + G+QLDLAKYA+D + +++A   V LLTPVAKAF TD GL++ ++ QQVFGG
Sbjct: 360 GGRAFSTYVGQQLDLAKYAEDQEERSQAEALVALLTPVAKAFFTDTGLESCVLGQQVFGG 419

Query: 414 HGYIRETGVEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATLKEFVAELKAQMREF 473
           HGYIRE G EQLVRD RIAQIYEGTNGIQA+D +GRKV  +    L  F  E++A     
Sbjct: 420 HGYIREWGQEQLVRDVRIAQIYEGTNGIQALDLMGRKVVANGGLFLSIFSREVRAFAAGA 479

Query: 474 TQVDGVKIAAVCARLDALVNVAESVNEQKLTQPALINACAVDFLDAFGYSVYGFYWLAML 533
                  +  +   LD L N+ + +  +    P  I A +V++L  FGY+ Y + W  M 
Sbjct: 480 NAELAEFVTPLLTALDLLDNLTQGIVARAGNDPREIGAASVEYLHLFGYTAYAYLWARMA 539

Query: 534 DKV--PSAEDQNFAEQKAYLAKFYFDKLLPKADYHLAQVRAGDVSTMAMPAELF 585
                    D  F + K   A+FYF ++LP+     A V AG  S   + AE F
Sbjct: 540 AAALRQREADPAFHDGKLATARFYFARILPRVHSLAAAVEAGSESLYGLEAEQF 593