Pairwise Alignments

Query, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 5/139 (3%)

Query: 166 DTDHQMLNGKIIEHAKDLAGKFAAEVHLVNGFPGTPVNL-AIELP-DFDAQTYNDTIRLQ 223
           D + Q    K ++ A   A    AE+HL+N  PG  +++ A   P D  AQ  ND     
Sbjct: 10  DLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQL 69

Query: 224 HEQRVQYLADAYGIDKQNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNT 283
                +++A+         H+ EG P   I + AE+L A+L+++ +  R+     ++G+ 
Sbjct: 70  KAFAEKHIAEEV---VYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSV 126

Query: 284 AEHVIDSINCDLLAIKPDG 302
           A  V+++   +++ +KP G
Sbjct: 127 ASKVVENSPINVMVVKPQG 145



 Score = 32.3 bits (72), Expect = 7e-06
 Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)

Query: 4   YQKILVVVDPTTEN--QVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREA-M 60
           Y+ ILV VD   +     A+  AV  A  SNA + +   +      M +    ++  A M
Sbjct: 2   YKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQM 61

Query: 61  RQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHAHD 120
           +  V  Q  A+ +  +A      L+I        +P+ +I+++A     DLIV  +H   
Sbjct: 62  KNDVRAQLKAFAEKHIAEEVVYKLHIA-----EGKPYATILDYAERLGADLIVMPSHKRS 116

Query: 121 KLKAVIFTPTDWHLMRKAPVPVLMVK 146
           ++  V+       ++  +P+ V++VK
Sbjct: 117 RIDKVMLGSVASKVVENSPINVMVVK 142