Pairwise Alignments

Query, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 145 a.a., universal stress protein from Methanococcus maripaludis S2

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 244 VKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLAIK 299
           + EG P   I E AE  +A+L+++GT G+TG    L+G+ AE V+   +C +L +K
Sbjct: 87  ILEGTPSKEIVEYAEAKNADLIVMGTTGKTGLDKLLLGSVAERVLKKSHCPVLLVK 142



 Score = 37.4 bits (85), Expect = 2e-07
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 3/146 (2%)

Query: 4   YQKILVVVDPTTENQVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREAMRQG 63
           Y+KI++  D +  +  A  +A+ LA  +   V   + + D       + +    E+M++ 
Sbjct: 3   YKKIIMPTDGSKISIEAAEQAIDLAKATEGRV-YGIYVIDI-VPFVGLPTEGLWESMKEV 60

Query: 64  VIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHAHDKLK 123
           +  +    ++ L       G+ I T+++    P + I+ +A A   DLIV GT     L 
Sbjct: 61  LEKEGHTALRTLTDIAREKGVEIKTEIL-EGTPSKEIVEYAEAKNADLIVMGTTGKTGLD 119

Query: 124 AVIFTPTDWHLMRKAPVPVLMVKDHD 149
            ++       +++K+  PVL+VK  +
Sbjct: 120 KLLLGSVAERVLKKSHCPVLLVKSSE 145