Pairwise Alignments

Query, 206 a.a., outer membrane lipoprotein carrier protein LolA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 203 a.a., outer membrane lipoprotein carrier protein LolA (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (496), Expect = 4e-55
 Identities = 94/203 (46%), Positives = 135/203 (66%), Gaps = 3/203 (1%)

Query: 1   MKKLLCAVLLSPLLYSNAVLADDAKQLRETLTGTESLKADFKQTVTDVNKKVIQSGAGVF 60
           MKK +  +  + L +  AV ADDAK+L   L   + +KA+F Q VTD N K+IQ G+GV 
Sbjct: 1   MKKSIVVLFSAVLPF--AVFADDAKELVSKLDVMQGIKANFSQKVTDQNGKLIQEGSGVI 58

Query: 61  ALAHPNQFYWHLTAPDESKIVADGKDLWIYNPFAEEVVIMDFTQAITASPIALLVHRDDA 120
           A+  P+ FYWHLTAPDES IVA    +W+YNPFAEEV I+D    + ASP+ALLVHRD+ 
Sbjct: 59  AMHQPDAFYWHLTAPDESLIVAKDNSVWVYNPFAEEVSILDMEDILKASPMALLVHRDEK 118

Query: 121 TWSQYAVTKKQDCYEIKPK-ATDAGISAVNVCFNKGTLNKFNVLDDKGNLSQFDLSNQHS 179
            W++Y + +K  C++I P+   ++ +  V+VCF   TL+   + D +G+ S F LS Q +
Sbjct: 119 RWNEYQIDRKGSCFDITPRQGVESAVDTVSVCFANNTLSDIRLTDAQGSTSHFSLSEQAA 178

Query: 180 ISTGDKALFKFVLPDNVDVDDQR 202
           ++  D++LF+F +PD V +DDQR
Sbjct: 179 VTDADESLFQFQIPDGVSIDDQR 201