Pairwise Alignments

Query, 206 a.a., outer membrane lipoprotein carrier protein LolA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., outer membrane lipoprotein carrier protein LolA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 26/213 (12%)

Query: 5   LCAVLLSPLLYSNAVLADDAKQLRETLTGTESLKADFKQTVTDVNKKVIQSGAGVFALAH 64
           LCA +      + A   +   +L++    T +LKADF Q +        ++  G      
Sbjct: 19  LCAAMALSAAPARAA-GELTNRLQQRYDATTTLKADFTQVLLHRESGARETRQGTLQFRK 77

Query: 65  PNQFYWHLTAPDESKIVADGKDLWIYNPFAEEVVIMDFTQAITASPIALLVHRDDATWSQ 124
           P    W   AP    +V    ++W Y P  EEV      + +  S   + V    A    
Sbjct: 78  PLLVRWETKAPHAELLVVTAAEIWNYLP-DEEVAYKYPVELVQDSRSIIKVITGQA---- 132

Query: 125 YAVTKKQDCYEIKPKATDAGISAVN----------------VCFNKGTLNKFNVLDDKGN 168
               K +  +++  +A D G++ ++                V  N   + +  ++D  GN
Sbjct: 133 ----KLEQDFDVAEEADDNGMARLHMYPKEPTPQLTEAFLWVDPNTNLIRRAKIIDFYGN 188

Query: 169 LSQFDLSNQHSISTGDKALFKFVLPDNVDVDDQ 201
            +   L++  + +    + F+F  P  VDV+D+
Sbjct: 189 ENNITLNSLATDAGVQDSAFRFAPPKGVDVEDR 221