Pairwise Alignments

Query, 208 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (326), Expect = 2e-35
 Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 5/196 (2%)

Query: 12  WTLMVSAAFFCATMTMTPGPNNILLASSGAHFGVMRTLPHIAGIRLGSTSLHLSVLLGLG 71
           +TL      F    T +PGPNNI+L +SGA+ G +RT+PH+ GI  G + + L V +GL 
Sbjct: 13  YTLFGPLLAFAFVSTFSPGPNNIMLMTSGANVGFLRTIPHMLGITFGFSIMVLLVGVGLT 72

Query: 72  ALFEVFPYLHHILKYAALLYLLHLAYRLVTSPVNAAHLDEGRKPMSLMEAALFQWINPKS 131
            LF+ +P L   L+    LYL++LA ++  S    +   +  +PMS + AALFQW+NPK 
Sbjct: 73  ELFQRYPILQQGLQILCTLYLVYLAVKIALS--RPSKEGQEYQPMSFVAAALFQWVNPKG 130

Query: 132 WMSTITLCSAFTLGGEGFWLSALLGVLVFNLVGFPASFTWVFVGAAISKTLNTDKRRRHF 191
           W   +T  S F       WL   L  LVF LV  P+   W   G  +S  +N     R F
Sbjct: 131 WSMALTAVSVFNPNAS--WLQLGLIALVFALVNLPSVSAWTAAGKQLSYWMNHPNYVRWF 188

Query: 192 NWFMGSLLLVS-LPMI 206
           N  MG LLL+S +PM+
Sbjct: 189 NGAMGGLLLLSVVPML 204