Pairwise Alignments

Query, 208 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 205 a.a., translocator protein, LysE family from Phaeobacter inhibens DSM 17395

 Score =  124 bits (312), Expect = 9e-34
 Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 11/200 (5%)

Query: 12  WTLMVSAAFFCATMTMTPGPNNILLASSGAHFGVMRTLPHIAGIRLGSTSLHLSVLLGLG 71
           + L ++ A F      TPGPNN++L +SGA+FG  R+LPH+ G+ +G   + L V LG+ 
Sbjct: 10  YELFLALAAFVFGTVFTPGPNNLMLMASGANFGFRRSLPHLTGVAVGFPLMILPVGLGVM 69

Query: 72  ALFEVFPYLHHILKYAALLYLLHLAYRLVTSPVNAAHLDEGR---KPMSLMEAALFQWIN 128
            LF+ FP L  I+   ++ Y+L LA+++     NAA   EG     P+S ++A  FQW+N
Sbjct: 70  QLFDAFPALTWIMTALSVAYMLWLAWKV----ANAAPPREGEAQGTPLSFLQACAFQWVN 125

Query: 129 PKSWMSTITLCSAFTLGGEGFWLSALLGVL-VFNLVGFPASFTWVFVGAAISKTLNTDKR 187
           PK+W   +    A TL      ++A+L V   + LVG  ++ TW  +G  + + L    +
Sbjct: 126 PKAWAMAL---GAITLYAASRDVTAILWVSGTYLLVGCFSASTWTLLGQQLRRLLTRPAQ 182

Query: 188 RRHFNWFMGSLLLVSLPMIL 207
            R FNW M +LLL SL  IL
Sbjct: 183 LRAFNWTMAALLLASLAAIL 202