Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 472 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 3e-45
 Identities = 137/453 (30%), Positives = 206/453 (45%), Gaps = 25/453 (5%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           W+P L    GP Y  +   I   I    L  G +LPPQR LA ALG+   TV+RAY  A 
Sbjct: 10  WVPALGRAGGPLYLAIADEIAADIAAGRLEDGVRLPPQRALAAALGIDFTTVSRAYNEAR 69

Query: 65  QRGYVEARIGDGTYVNA----SPVPEMANLQLNMATCQQPLTDQISTLSDCLSLLAK--- 117
           +RG VE R+G GTYV A    +  P    L   +      ++  +  L D  +L  K   
Sbjct: 70  RRGLVEGRVGQGTYVTARRRSAVRPSSGGLAGGLLGSLVDMSMNLPPLFDDPALSEKMWA 129

Query: 118 DPTKLSQ-----LLGYR-ANPLDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLN 171
           D   L Q     L+ Y+     ++ +     WLK R  + Q+++L+   G Q A+ A + 
Sbjct: 130 DVAALDQRGPELLMRYQPVGGAERDRAAGAAWLKPRLGDLQADRLVVCTGAQGALLASVG 189

Query: 172 AFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLT 231
              TKGD +  E   YPG+R  A  +GI  + V +   G+    FE     ++PK +Y  
Sbjct: 190 MLATKGDRICAEALTYPGLRSLAAHMGIELVSVGIDRNGILPDAFEEACARYKPKALYCN 249

Query: 232 LNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVI 291
               NPT      ++R+ ++ +A+++   +IEDD    LP     PL  LA  L    V 
Sbjct: 250 PTLHNPTTATLPLERREAIVAIARRHGVVVIEDDAYGALPANPVPPLAALAPDL----VF 305

Query: 292 YISSLSKLFSGGLRQGFILVPEPLIAALRL--AIHSQCWMVSPLNVELACQLIKRGHITA 349
           +I+ L+K  S  LR  +++ P+   AA+RL  AI +   M SPL+  +A + ++ G   A
Sbjct: 306 HIAGLAKCLSPALRIAYLVAPD-RSAAVRLEGAIRATVGMTSPLSAAIATRWLEEGTAQA 364

Query: 350 NRDAIIRE---RQQQCIALGQRLGLTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRH 406
              AI  E   RQ+  I       L     G + W++LP           L   G+ +  
Sbjct: 365 VLAAIRTEAGARQRIAIKGLDGADLLADREGFHLWLKLPSRWSRGEFTAQLRMAGIGVVA 424

Query: 407 GDDFNCHD--NFIRLSLGGAENDTQFRLAIECI 437
            D F   D    +RL LG A    + R +++ I
Sbjct: 425 SDAFAISDPPEAVRLGLGAARTRDELRHSLDVI 457