Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  114 bits (286), Expect = 5e-30
 Identities = 103/411 (25%), Positives = 184/411 (44%), Gaps = 41/411 (9%)

Query: 38  KLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIGDGTYVNASP-----------VPE 86
           +LP  R+LAD L +++ TV+RAY    +RG +   +G G++V   P           + E
Sbjct: 2   RLPTHRKLADDLKLSVQTVSRAYDELIRRGLISGEVGRGSFVQTRPREPEPPYLPERLGE 61

Query: 87  MANLQLNMATCQQPLTDQISTLSDCLSLLAKDPTKLSQLLGYRANPL-DQHQQTFHHWLK 145
           + +L +    C+Q     +  +    + LA++    S  L +R N +  +H+     WL 
Sbjct: 62  LIDLSILKPVCEQ---YHLEKMRQGFAWLAEN-LPPSSALSFRPNMVFPRHRNVAAEWLL 117

Query: 146 QRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVP 205
           + G++     +  T+G   A+   L +    G  +  E   +  +   +  LGI+  G+ 
Sbjct: 118 RCGLDVSPLNINLTNGATSAMTVALMSVAPPGSTVATEAISHHTLVPLSTYLGIHLQGLA 177

Query: 206 LTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDD 265
           +  +G+     +   +    + ++L  +  NPT    S  +R  L E+A+++   IIE+D
Sbjct: 178 IDGDGMIPDALDEACRKGVIRAVFLQPSVINPTATLMSAGRRAALAEVARRHDIAIIEND 237

Query: 266 VNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHS 325
           +   L EE   P+  LA     +R +Y++S +K+   GLR G+++ P+  +AA+      
Sbjct: 238 ILGPLVEERLPPVAALAP----ERTLYVTSFTKITVPGLRIGYLVAPDRYVAAVANRHLV 293

Query: 326 QCWMVSPLNVELACQLIKRG----------HITANRDAIIRERQQQCIALGQRLGLTQRW 375
             WM +P   E+A Q +  G             A R AI +E       +   LG     
Sbjct: 294 SNWMATPAIAEIATQWVSDGTAIELVNWQRRALAARHAIAKE-------VLASLGHHTHP 346

Query: 376 RGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDFNCHDN----FIRLSLG 422
           + L+ W+ LPE  +    V+    +GV I  G  F   D+     +R+SLG
Sbjct: 347 QSLHVWLPLPEGHQEDAFVSQARLRGVAIAPGASFRTADSGWRPAVRISLG 397