Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 470 a.a., transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  111 bits (278), Expect = 4e-29
 Identities = 117/433 (27%), Positives = 177/433 (40%), Gaps = 47/433 (10%)

Query: 15  PKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIG 74
           P  +++V+ +   I  +    G+KLP  R+ A   GV+   V  AY      GYV++R G
Sbjct: 14  PLTEQIVAGVTAWIRSRAAHPGSKLPSIRQFAADYGVSRFPVIEAYDRLVSLGYVDSRHG 73

Query: 75  DGTYVNASPV----------PEMAN----------------LQLNMATCQQPLTDQISTL 108
            G YV   P           P  A                 L+L      +P  D  +  
Sbjct: 74  SGFYVADRPPGGSQCDGTSDPRRAEDESDHLLQQFNHPGETLKLGSGFIPEPWRDTDNIA 133

Query: 109 SDCLSLLAKDPTKLSQLLGYRAN-PLDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIF 167
                +L  DP  +        N  L +H Q     + Q GI   + Q++ T+G  QA  
Sbjct: 134 QAIRHVLRTDPASMVDYATPLGNLSLREHLQAR---IAQLGIRADTSQILITNGASQAFD 190

Query: 168 ACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKL 227
             +   L  GD +  E   Y  +    K  G+  IG+P T  G DL   +A ++ HRPKL
Sbjct: 191 LLMRYMLKAGDTIFVEDPGYYNLYGLLKLHGVRLIGIPRTRSGPDLDVMQAQLKRHRPKL 250

Query: 228 IYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNI 287
            ++     NPT    +     +LL+LA+++ F IIEDD+      +      +LA +  +
Sbjct: 251 FFINTVFHNPTGTTVAPPVAFRLLQLAREHNFTIIEDDIYADFQADITD---RLATLDQL 307

Query: 288 QRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVE-LACQLIKRGH 346
           + VIYI  LSK  S  LR G ++    +I  L + I     +   L  E +   L++RG 
Sbjct: 308 EHVIYIGGLSKTLSSSLRVGCVVASHAIIKDL-VDIKMLTSIGGSLFAETVTASLLERG- 365

Query: 347 ITANRDAIIRERQQQCIALGQRLGLTQ--RWR-------GLNGWIQLPEDIKAHHLVTAL 397
             A R  + R R++   ALG  +   +   W        G   W ++P    A  LV   
Sbjct: 366 --AYRKYLERLRRRMRDALGSTIQTLEDAGWEVFEKPVGGKFLWARVPHVDNAERLVECG 423

Query: 398 AAKGVLIRHGDDF 410
           A  GV +  G  F
Sbjct: 424 APLGVTVAPGSYF 436