Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 443 a.a., transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  132 bits (331), Expect = 3e-35
 Identities = 114/425 (26%), Positives = 184/425 (43%), Gaps = 27/425 (6%)

Query: 16  KYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIGD 75
           +Y+ LV  +   I    L  GT+LP  R LA   G+ + T TR YA  +  G V    G 
Sbjct: 5   RYKHLVDRLAAEIRAGRLQPGTRLPTHRELAAREGIALVTATRVYAELQSIGLVSGETGR 64

Query: 76  GTYVNASPVPEMANLQLN--------MATCQQPLTDQISTLSDCLSLLAKDPTKLSQLLG 127
           GT+V   P+P    + L+        ++        Q+++    L  LA     L+ LL 
Sbjct: 65  GTFVK-EPLPRGEGIDLHAWDADTVDLSFNYPASAGQVASFRTALRDLA-GAGDLAALLR 122

Query: 128 YRANPLDQHQQ-TFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYC 186
           Y+ +   +HQ+ T    L   G+    + ++   G Q  +     A L  GDV+  +   
Sbjct: 123 YQPHGGREHQRATVARHLAGAGLSATPDTVLLVSGAQHGLATTTLALLEPGDVVAVDSLT 182

Query: 187 YPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQ 246
           YPG ++ A+   +  + VP    G DL    AL +  R + +Y      NP     S  +
Sbjct: 183 YPGFKLAAEINRLELVAVPAAGNGPDLDALAALCKRRRVRAVYTMPTLHNPLGWVMSATR 242

Query: 247 RQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKLFSGGLRQ 306
           R++L+ +A+++   IIED     L E    PL  LA  L     +Y+SSLSK  + GLR 
Sbjct: 243 RRELVAIARRHGLLIIEDAAYAFLVENAPPPLATLAPEL----TVYVSSLSKSVATGLRV 298

Query: 307 GFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGHI-----TANRDAIIRERQQQ 361
           GFI  P   +  L   I +  W        +AC  ++ G +        RDA +R+    
Sbjct: 299 GFIHAPASFVPKLERTIRATTWNTPATLTAIACGWLEDGTVDLFAADKRRDAAVRQAMAT 358

Query: 362 CIALG-QRLGLTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDFNCHDNF---I 417
            +  G +R+G    +     W+ L ++++A  +  AL  + + +     F    +    I
Sbjct: 359 RLLSGVKRIGHPVSY---FLWLPLAQEVRADAIAMALRREKIAVSTAHPFATSPHVPHAI 415

Query: 418 RLSLG 422
           RL+LG
Sbjct: 416 RLALG 420