Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 515 a.a., transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  115 bits (289), Expect = 3e-30
 Identities = 121/449 (26%), Positives = 190/449 (42%), Gaps = 63/449 (14%)

Query: 15  PKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIG 74
           P Y++ +  ++Q IL  +LP GTKLP  R LA+ LG+   TV   Y      GYV +  G
Sbjct: 21  PIYRQTLRLMQQAILAGQLPPGTKLPSSRTLAEDLGIARNTVLHVYDQLTAEGYVISTTG 80

Query: 75  DGTYV-NASPVPEMANLQLNMA----------------TCQQPLTDQIST---------- 107
            GTYV +  P     N +   A                T ++ L D  +           
Sbjct: 81  SGTYVADTQPDTAAVNARRKPAVTAVDSEGKPVAVPGKTAKRDLNDLSNRGRRLIGQAGV 140

Query: 108 -----------LSDCLSLLAKDPTKLSQLLGYRANP----------LDQHQQTFHHWLK- 145
                      + D     A+  ++L   L   ANP              ++    +L+ 
Sbjct: 141 SAKQWGAFMPGVPDVAEFPARTWSRLQARLWKEANPDLLTYAPGGGYRPLRRALSDYLRV 200

Query: 146 QRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVP 205
            R +    +Q+I T G  Q+I   +      GD    E+ CY G R   +  GI  + VP
Sbjct: 201 ARSVNCTPDQIIITTGIHQSIDLAVRLLTDVGDRAWVEEPCYWGARSVLQSSGITLVPVP 260

Query: 206 LTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDD 265
           +  EG++  R + L Q   P+L  +T ++Q P  +  S  +R+ LLE A+Q+  +IIEDD
Sbjct: 261 VDEEGLN-PREQDLQQ--PPRLALVTPSHQYPLGMVMSLARRRTLLEYARQHNVWIIEDD 317

Query: 266 VNYCLPEEWHS-PLWQLAQVLNIQRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIH 324
             Y     + S PL  L  + +  +VIY+ SL K+   GLR G+++ PE L+   R+ I 
Sbjct: 318 --YDSEFRYGSRPLASLQGLDDAGQVIYVGSLGKMLFPGLRMGYMIAPEHLVDTFRMGIA 375

Query: 325 SQCWMVSPLNVELACQLIKRGHITAN---RDAIIRERQQQCI-----ALGQRLGLTQRWR 376
                   +   +    I  GH+T++     A+  ER+Q  I       G  L +     
Sbjct: 376 ELYREGQLMQQAVMTDFIMDGHLTSHVRRMRALYGERRQILIDAITARFGTELPVMGDEA 435

Query: 377 GLNGWIQLPEDIKAHHLVTALAAKGVLIR 405
           GL+  + LP+      +  A    GV++R
Sbjct: 436 GLHLVLGLPDHADDRAVTAAAFDAGVIVR 464