Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 493 a.a., transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  142 bits (357), Expect = 3e-38
 Identities = 128/445 (28%), Positives = 194/445 (43%), Gaps = 20/445 (4%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           W+  L     P Y  +   IE+ +    L    +LP  R LA AL +   TV RAYA A 
Sbjct: 38  WLKRLTESRKPAYLVIPDLIEEDLASGRLRPRDRLPGLRDLAGALQLNYTTVARAYAEAR 97

Query: 65  QRGYVEARIGDGTYVNAS----PVPEMANLQLNMATCQQPLTDQISTLSDCLSLLAK-DP 119
           +RG ++AR G GT+V       P+   ++++++M    +P             LLA  DP
Sbjct: 98  KRGLLDARAGSGTFVRGRTQTLPLAGGSSVEMSMNMPPEPPELAARLRESSAHLLAHTDP 157

Query: 120 TKLSQLLGYRANPLDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDV 179
            +L +   +   P D+       WLK+R  E + + ++   G   A+ A ++     G+ 
Sbjct: 158 YRLLRYQDFGGTPDDR--AAGRAWLKERLPECEDDMVLVCPGIHSALVALVSQLARPGET 215

Query: 180 LLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTC 239
           +  +   YPGI+  A QLG+    +P   EG     FEAL +  +P   Y     QNP+ 
Sbjct: 216 ICLDTLAYPGIKAIASQLGVRLQPLPRDEEGPLPHAFEALCKTGKPGAFYCNPTLQNPST 275

Query: 240 IQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKL 299
           +  S Q+R+ L ++A +Y   IIEDD    LP      L  LA  L      Y++  SK 
Sbjct: 276 LTLSTQRREALADVALRYSVPIIEDDAYGWLPANRPVALASLAPEL----TWYVTGFSKT 331

Query: 300 FSGGLRQGFILVPEP-LIAALRLAIHSQCWMVSPLNVELACQLIKRGHITANRDAIIRER 358
           F  GLR  ++  P       +  A+ +   M SP  V LA Q +  G      DAI +E 
Sbjct: 332 FGAGLRVAYLRAPTARQTQRVAGALRATTVMPSPFTVLLATQWVNDGTAHEMLDAIRKEA 391

Query: 359 QQQCIALGQRLG---LTQRWRGLNGWIQLPE--DIKAHHLVTALAAKGVLIRHGDDFNCH 413
             +     Q L       +  G + W+ +P   D  A  L   L  +GV    G  F+  
Sbjct: 392 NVRQTIASQELADWHYEAQSDGFHLWLPIPPQCDWSASELALQLRNQGVGAVAGAAFSTD 451

Query: 414 ---DNFIRLSLGGAENDTQFRLAIE 435
               N IR+ LGG ++    R A++
Sbjct: 452 GNPPNTIRVCLGGPQDREGCRQALQ 476