Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 515 a.a., decarboxylase from Burkholderia phytofirmans PsJN

 Score =  115 bits (289), Expect = 3e-30
 Identities = 118/449 (26%), Positives = 189/449 (42%), Gaps = 63/449 (14%)

Query: 15  PKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIG 74
           P Y++ +  ++Q IL  +LP GTKLP  R LA+ LG+   TV   Y      GYV +  G
Sbjct: 21  PVYRQTLRLMQQAILTGQLPPGTKLPSSRTLAEDLGIARNTVLHVYDQLTAEGYVISTTG 80

Query: 75  DGTYV----------NASPVPEMANLQLNMATCQQ---PLTDQISTLS------------ 109
            GTYV          N    P +A++    +T ++   P    ++ LS            
Sbjct: 81  SGTYVADTRPDTAAVNMRRKPAVASVDKEDSTARETTKPPKRDLNDLSARGRRLIDKAGV 140

Query: 110 -------------DCLSLLAKDPTKLSQLLGYRANP----------LDQHQQTFHHWLK- 145
                        D     A+  ++L   L   ANP              ++    +L+ 
Sbjct: 141 SAKQWGAFMPGVPDVAEFPARTWSRLQARLWKEANPDLLTYAPGGGYRPLRRALSDYLRV 200

Query: 146 QRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVP 205
            R +    +Q+I T G  Q+I   +      GD    E+ CY G R   +  GI  + VP
Sbjct: 201 ARSVNCTPDQIIITTGIHQSIDLAVRLLTDVGDRAWVEEPCYWGARSVLQSSGITLVPVP 260

Query: 206 LTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDD 265
           +  EG++    +       P+L  +T ++Q P  +  S  +R+ LLE A+Q+  +IIEDD
Sbjct: 261 VDDEGLNPSEQDLQ---QPPRLALVTPSHQYPLGMVMSLARRRTLLEYARQHNVWIIEDD 317

Query: 266 VNYCLPEEWHS-PLWQLAQVLNIQRVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIH 324
             Y     + S PL  L  +    +VIY+ SL K+   GLR G+++ PE L+   R  + 
Sbjct: 318 --YDSEFRYGSRPLASLQGLDEAGQVIYVGSLGKMLFPGLRIGYMIAPEHLVDTFRTGVA 375

Query: 325 SQCWMVSPLNVELACQLIKRGHITAN---RDAIIRERQQQCI-----ALGQRLGLTQRWR 376
                   +   +  + I  GH+T++     A+  ER+Q  I       G  L +     
Sbjct: 376 ELYREGQLMQQAVMTEFIMDGHLTSHVRRMRALYGERRQILIDAITARFGSELPVMGDEA 435

Query: 377 GLNGWIQLPEDIKAHHLVTALAAKGVLIR 405
           GL+  + LP+      +  A    GV++R
Sbjct: 436 GLHLVLGLPDHANDRAVTAAAYDAGVIVR 464