Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 469 a.a., GntR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  139 bits (349), Expect = 3e-37
 Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 21/440 (4%)

Query: 17  YQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAEQRGYVEARIGDG 76
           Y  + S+IE  I     P G++LPPQR+LA  LG+ + TV+RAY   + RG V      G
Sbjct: 23  YIEVSSSIENEIRSGIYPPGSRLPPQRQLATELGINVSTVSRAYKELQLRGLVIGSKRRG 82

Query: 77  TYVNASPVPEMANLQLNMA-------TCQQPLTDQ-ISTLSDCLSLLAKDPTKLSQLLGY 128
           + V    +P +   Q           T  +P T + ++ L+  L+ L +DP +  QL  Y
Sbjct: 83  SLVTGGAMPSVEPAQARATSNAVIDLTVNRPATGEFLNCLARTLADLPRDP-RYPQLQEY 141

Query: 129 RANPLDQHQQTFH-HWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDVLLHEQYCY 187
           +        +     W+   G    ++ ++ T G Q  ++A LN+ +    V+L +Q  Y
Sbjct: 142 QPPQGPAWARAAGARWMAAPGFAPSADHVVVTSGAQHGLYAVLNSLIGTDGVILADQLTY 201

Query: 188 PGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTCIQYSEQQR 247
            G++  A       +G+P   EG+     E   +    K I+   N QNPT    S ++R
Sbjct: 202 YGLKALAPVFQFEIVGIPSDREGLLTDEVERACRRMPVKAIFTVPNLQNPTVTTMSLERR 261

Query: 248 QQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKLFSGGLRQG 307
             L+++A+++   IIEDDV   L  +    +  L   L      ++++ SK+ + GLR G
Sbjct: 262 MALVDIARRHGVAIIEDDVYGPLVSQRLPTIASLCPEL----TFHLAATSKILAPGLRLG 317

Query: 308 FILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRG---HITANRDAIIRERQQQCIA 364
           ++L P    A    A+ +  WM +P+++ +A   I+ G   HI   + A IR RQ     
Sbjct: 318 YLLSPPDSAALCAEAVRTTAWMPAPMSMLIASIWIEDGTARHIMDAQLAEIRARQDLARE 377

Query: 365 LGQRLGLTQRWRGLNGWIQLPEDIKAHHLVTALAAKGVLIRHGDDFNCH----DNFIRLS 420
           L  +  L      +  W++LP   +A        A+GV++     F       ++ +R++
Sbjct: 378 LLPQELLQTDPACMFVWLKLPPPWRADDFAANAKARGVVVMPSSAFAVDRSEIEHGVRIN 437

Query: 421 LGGAENDTQFRLAIECIEST 440
           L  A +  Q   A+  +  T
Sbjct: 438 LACATSRDQLVSALRLLTGT 457