Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 463 a.a., GntR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  145 bits (365), Expect = 4e-39
 Identities = 124/455 (27%), Positives = 198/455 (43%), Gaps = 26/455 (5%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           WI  L     P Y  +   IE+ +    L    +LP  R LA  L +   TV RAYA A 
Sbjct: 8   WIKRLADIRKPAYLAIPDLIEEDLATGRLRPRDRLPGLRDLALELALNYTTVARAYAEAR 67

Query: 65  QRGYVEARIGDGTYVNAS----PVPEMANLQLNMATCQQPLTDQISTLSDCLSLLA-KDP 119
           +RG +++R G GT+V       P+   ++++++M T  +P    I         +A  DP
Sbjct: 68  KRGLLDSRAGSGTFVRGRTATLPLAGGSSIEMSMNTPPEPPDFAIRLRESAARQMADSDP 127

Query: 120 TKLSQLLGYRANPLDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLTKGDV 179
            +L +   +  +  D+       WL++R     ++ ++   G   A+ A ++     G  
Sbjct: 128 YQLLRYQDFGGSAADKDAGA--EWLRRRVPHCDAQNVLVCPGIHSALVALVSQLARPGGT 185

Query: 180 LLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQNPTC 239
           +  +   YPGI+  A QLG+    +P   EG     FEAL +  +P   Y     QNP+ 
Sbjct: 186 ICLDSLAYPGIKAIAAQLGVRLQALPRDDEGPLAHAFEALCKTDKPSAFYCNPTLQNPST 245

Query: 240 IQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRVIYISSLSKL 299
           +  + ++R+ L ++A +Y   IIEDD    LP+     L   A  L      Y++ LSK 
Sbjct: 246 LTLTHKRREALADVALRYSVPIIEDDAYAMLPQNAPDALASFAPEL----TYYVTGLSKS 301

Query: 300 FSGGLRQGFILVPEP-LIAALRLAIHSQCWMVSPLNVELACQLIKRGHITANRDAIIRER 358
           F  GLR   +  P P     L  A+ +   M SP  V LA + I  G      +AI  E 
Sbjct: 302 FGAGLRVAHLHAPTPRQTQRLAGALRATTVMASPFTVTLATRWIADGTAADMLNAIRNES 361

Query: 359 QQQCIALGQRLGLTQRWR------GLNGWIQLPEDI--KAHHLVTALAAKGVLIRHGDDF 410
           + + I   + LG    WR      G + W+ +P +    A  L   L  +G+    G  F
Sbjct: 362 RARQIIASRMLG---AWRYEAHQDGFHLWLPVPVESGWSASELALQLRNQGIAAVAGAAF 418

Query: 411 NCH---DNFIRLSLGGAENDTQFRLAIECIESTFN 442
           +      N +RL LGG++   +   A+  +  T +
Sbjct: 419 STDGNPPNAMRLCLGGSKTRDECEEALRIVAETLD 453