Pairwise Alignments

Query, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 471 a.a., GntR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  150 bits (380), Expect = 7e-41
 Identities = 129/438 (29%), Positives = 209/438 (47%), Gaps = 23/438 (5%)

Query: 5   WIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALAE 64
           W P L+   GP Y  + +A+ + I + EL  G +LPPQR LA  LG+   TV+R YA A+
Sbjct: 7   WTPILEGGNGPTYLAIANAVAESINKGELRVGDRLPPQRSLAALLGIDFTTVSRGYAEAQ 66

Query: 65  QRGYVEARIGDGTYVNA--SPVPEMANLQ-LNMATCQQPLTDQISTLSDCL-----SLLA 116
           +RG +EAR+G GTYV A   P   + N+  ++M   Q P  D   TL   +     ++LA
Sbjct: 67  RRGLLEARVGRGTYVKAIQRPSATLTNVSGIDMLINQPPPFDD-PTLEKRIWEGVPAMLA 125

Query: 117 KDPTKLSQLLGYRA-NPLDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACLNAFLT 175
           +    +  L+ Y+  +   + +    +WL QR      E+++   G Q A+ A      +
Sbjct: 126 E--RGMEMLMRYQVPSGAMRDRLVGANWLTQRIPGLGPERVLVCPGAQGALLAVSMMLAS 183

Query: 176 KGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYLTLNNQ 235
            GD +  E   YPG  + AK+LG+    V +   G      +A+ +  +PK  Y T    
Sbjct: 184 AGDTICVEALTYPGCLLLAKELGVRLSAVEMDEHGAMPESLDAICRSEKPKAFYCTPIVH 243

Query: 236 NPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCL---PEEWHSPLWQLAQVLNI--QRV 290
           NPT I     +R  L+E+A++++  IIEDD  + L   P++    L +L  + ++  + V
Sbjct: 244 NPTTITMPLDRRIALVEVARRHKLPIIEDDNYWPLVNSPDDSADALRELPALASLAPELV 303

Query: 291 IYISSLSKLFSGGLRQGFILVPEPLIA-ALRLAIHSQCWMVSPLNVELACQLIKRGHITA 349
            YIS L+K  S  LR  ++ VP+   A    + I +   M +PL+  +A   I+ G    
Sbjct: 304 HYISGLAKCVSPALRIAYLAVPDQSSAERASVVIRATASMAAPLSAAVATYWIESGLAEE 363

Query: 350 NRDAIIRERQQQCIALGQRLGLTQRWR---GLNGWIQLPEDIKAHHLVTALAAKGVLIRH 406
              AI  E + +     + L      R   G + W+ LP     +  +T L   G+ +  
Sbjct: 364 MLSAIRTESEARQAIAHRHLAADLENRHGYGFHLWLPLPVPWTCNAFITQLKLSGISVAG 423

Query: 407 GDDFNCHD--NFIRLSLG 422
            D F+  +  + +RL LG
Sbjct: 424 TDAFSVSEAPDGVRLCLG 441