Pairwise Alignments

Query, 620 a.a., chaperone protein HscA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

 Score =  789 bits (2037), Expect = 0.0
 Identities = 415/621 (66%), Positives = 488/621 (78%), Gaps = 6/621 (0%)

Query: 1   MALLQIAEPGQSAAPHQHRLAVGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPSIVRYT 60
           MALLQIAEPGQS+APHQH+LA GIDLGTTNSLVA+VRSG  +TL D  G+  LPS+V Y 
Sbjct: 1   MALLQIAEPGQSSAPHQHKLAAGIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYG 60

Query: 61  QEGIEVGYVAAMSSAQDPKNTIVSVKRFMGRSLTDIQSGEQSFPYQFEASENGLPLFVTP 120
            +   VGY A   +  DP NT++SVKR +GRSL DI       PY+F+ASE GLP+  T 
Sbjct: 61  ADATRVGYPAREQAETDPHNTVISVKRLLGRSLQDINQRYPHLPYRFKASEKGLPIVQTA 120

Query: 121 QGLVNPVQVSAEILRPLIERAEKTLGGELQGAVITVPAYFDDAQRQGTKDAASLLGVKVL 180
           QG  NP+Q+SA+IL+ L ERA  TLGGEL G VITVPAYFDDAQR  TKDAA+L G+ VL
Sbjct: 121 QGDKNPIQISADILKALAERATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVL 180

Query: 181 RLLNEPTAAAIAYGLDSKQEGVIAIYDLGGGTFDISILRLNRGVFEVLATGGDSALGGDD 240
           RLLNEPTAAAIAYGLDS QEGVIA+YDLGGGTFDISILRL+RGVFEVLATGGDSALGGDD
Sbjct: 181 RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD 240

Query: 241 FDHLLQAHMLQVWQLTDIDSQLSRQLLIEARRVKEALTYASDTEASLTLADGSVLKQVVT 300
           FDHL+  H+     LT + ++  R L+  A + K  LT     E ++    GS+     T
Sbjct: 241 FDHLIADHLQAQIGLTSLTAEQQRALINAATQAKIDLTEYMTAELNVLGWQGSL-----T 295

Query: 301 KAQFEGLIAALVKKTIASCRRTLRDAGVTADEVLETVMVGGSTRVPLVREQVEAFFGKAP 360
           + + E LIA L+KKT+ SCRR L+DAGV ADEVLE VMVGGSTR P VREQV  FFG+ P
Sbjct: 296 REELENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTP 355

Query: 361 LTSIDPDRVVAIGAAIQADILVGNKPESELLLLDVIPLSLGIETMGGLVEKVVSRNTTIP 420
           LTSI+PD VVAIGAAIQADIL GNKP++E+LLLDVIPLSLGIETMGGLVEK++ RNTTIP
Sbjct: 356 LTSINPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIP 415

Query: 421 VARAQEFTTFKDGQTAMAFHVVQGERELVDDCRSLARFTLKGIPPLAAGAAHIRVTFQVD 480
           VARAQEFTTFKDGQTAM+ HVVQGERE+VDDCRSLARF+LKGIPP+AAGAAHIRVT+QVD
Sbjct: 416 VARAQEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVD 475

Query: 481 ADGLLSVTAMEKSTGVQSSIQVKPSFGLSDSEIATMLKDSMKHAKEDIGRRMLAEQQVEA 540
           ADGLLSVTA+EKSTGVQ+ IQVKPS+GLSD E+  MLKDSM +AKED+  R LAEQ+VEA
Sbjct: 476 ADGLLSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEA 535

Query: 541 ARVLESLNAALSKDGD-LLTSDERQQIDTVMAELVQVAGSDDADTIKKAIEILDEHTQDF 599
            RV+E L +AL  DGD LL   ERQ +   +  L+++   D+AD I++ I+  D+ +QDF
Sbjct: 536 DRVIEGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKASQDF 595

Query: 600 AAKRMDNSIRVAFKGQSIDKI 620
           A++RMD SIR A  G S+D+I
Sbjct: 596 ASRRMDKSIRSALAGHSVDEI 616