Pairwise Alignments

Query, 620 a.a., chaperone protein HscA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 641 a.a., molecular chaperone DnaK from Sinorhizobium meliloti 1021

 Score =  437 bits (1124), Expect = e-127
 Identities = 259/610 (42%), Positives = 380/610 (62%), Gaps = 29/610 (4%)

Query: 22  VGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPSIVRYTQEGIE-VGYVAAMSSAQDPKN 80
           +GIDLGTTNS V+ +       + +  G  + PS+V +T++G   VG  A   +  +P+N
Sbjct: 5   IGIDLGTTNSCVSVMDGKDAKVIENAEGARTTPSMVAFTEDGERLVGQPAKRQAVTNPEN 64

Query: 81  TIVSVKRFMGRSLTD--IQSGEQSFPYQFEASENGLPLFVTPQGLVNPVQVSAEILRPLI 138
           T+ ++KR +GR+  D   Q  +   PY+   ++NG           +P Q+SA IL+ + 
Sbjct: 65  TLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWVEAHGTSYSPSQISAMILQKMK 124

Query: 139 ERAEKTLGGELQGAVITVPAYFDDAQRQGTKDAASLLGVKVLRLLNEPTAAAIAYGLDSK 198
           E AE  LG +++ AVITVPAYF+DAQRQ TKDA  + G+ VLR++NEPTAAA+AYGLD K
Sbjct: 125 ETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKK 184

Query: 199 QEGVIAIYDLGGGTFDISILRLNRGVFEVLATGGDSALGGDDFDHLLQAHMLQVW---QL 255
           +   IA+YDLGGGTFDIS+L +  GVFEV +T GD+ LGG+DFD  L  ++   +   Q 
Sbjct: 185 EGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQG 244

Query: 256 TDI-DSQLSRQLLIEA-RRVKEALTYASDTEASLTL--ADGSVLKQVVTK---AQFEGLI 308
            D+ + +L+ Q L EA  + K  L+ +  TE +L    AD S  K +  K   A+FE L+
Sbjct: 245 IDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTMKLSRAKFESLV 304

Query: 309 AALVKKTIASCRRTLRDAGVTADEVLETVMVGGSTRVPLVREQVEAFFGKAPLTSIDPDR 368
             L++KTIA C+  L+DAGV+A E+ E V+VGG TR+P V+E V+  FGK P   ++PD 
Sbjct: 305 EDLIQKTIAPCKAALKDAGVSAAEIDEVVLVGGMTRMPKVQETVKQLFGKEPHKGVNPDE 364

Query: 369 VVAIGAAIQADILVGNKPESELLLLDVIPLSLGIETMGGLVEKVVSRNTTIPVARAQEFT 428
           VVA+GAAIQA +L G+    ++LLLDV PLSLGIET+GG+  +++ RNTTIP  ++Q F+
Sbjct: 365 VVAMGAAIQAGVLQGDV--KDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFS 422

Query: 429 TFKDGQTAMAFHVVQGERELVDDCRSLARFTLKGIPPLAAGAAHIRVTFQVDADGLLSVT 488
           T  D Q+A+   V QGERE+  D + L +F L GIPP   G   I VTF +DA+G++ V+
Sbjct: 423 TADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVS 482

Query: 489 AMEKSTGVQSSIQVKPSFGLSDSEIATMLKDSMKHAKEDIGRRMLAEQQVEAARVLESLN 548
           A +K TG +  I+++ S GLSD+EI  M+KD+  +A+ D  RR   E + +A  ++ S  
Sbjct: 483 AKDKGTGKEHQIRIQASGGLSDAEIEKMVKDAEANAEADKKRREGVEAKNQAESLVHSSE 542

Query: 549 AALSKDGDLLTSDERQQIDTVMAELVQVAGSDDADTIKKAIEILDEHTQDFAAKRMDNSI 608
            +L + GD ++  +R+ I+  +A L            K A+E+ +   +D  AK  +  +
Sbjct: 543 KSLQEHGDKVSETDRKAIEDAIAAL------------KSAVEVSEPDAEDIKAK-TNTLM 589

Query: 609 RVAFK-GQSI 617
            V+ K GQ+I
Sbjct: 590 EVSMKLGQAI 599