Pairwise Alignments

Query, 416 a.a., lipoprotein releasing system transmembrane protein LolC, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Dechlorosoma suillum PS

 Score =  327 bits (839), Expect = 3e-94
 Identities = 181/414 (43%), Positives = 258/414 (62%), Gaps = 3/414 (0%)

Query: 1   MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLL 60
           MK P  L +G R+ RA++ N FISFIS  S AGIALGVA LI+VLS MNGF++EL  R+L
Sbjct: 1   MKLPYELLVGLRYTRAKRRNHFISFISLISMAGIALGVAALIVVLSVMNGFQKELRTRIL 60

Query: 61  GVISQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
           GV S   V G+N  + +W  V +  LQ   + AAAPF++ Q ++ +    +G  V GI P
Sbjct: 61  GVASHIQVTGINGELHNWLEVGRQTLQHPEVKAAAPFVQAQAMLSRDETVRGTLVRGIIP 120

Query: 121 EQEAKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180
           E E KV+   +FM     ++L      IVLG  L   +G+ + D + L         AG 
Sbjct: 121 ELEDKVADFGRFMKAGKLENLQPGGFGIVLGSDLANAMGVTLEDKVTLIAPQGTVTPAGV 180

Query: 181 LRAAKSHRFVVSGVYRLGG-ELELTTAYIPMRYAANILNLHQGVTGVRISVTQVFEAPAK 239
           +   +S  F V G++  G  E +   A I M  A  +  L  GV+GVR+ +  +F AP  
Sbjct: 181 VPRLRS--FTVVGIFEAGMYEYDSGLALIDMSDAQLLYRLGDGVSGVRLKLDDLFRAPRV 238

Query: 240 IRELGYALNQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAVRD 299
            REL   + +  YISDWTR+  + ++ +Q+ + +M+++L L++ VA FNIVSTLVMAV D
Sbjct: 239 ARELVPLIQEDAYISDWTRSHANFFRAVQIEKNMMFIILSLIVAVAAFNIVSTLVMAVTD 298

Query: 300 KASEIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQLLG 359
           K ++IAIL T+G S  S+M +F+VQGAL G++G  LG V G+A A+N+  +   IE++LG
Sbjct: 299 KQADIAILRTLGASPRSIMAVFVVQGALIGVIGLGLGVVGGVALALNIDVVVPFIERVLG 358

Query: 360 IQLLSADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRIGPAQAL 413
            Q L+ DVY++  LPSEL   DV+ + A AFV++L ATLYP+W+ASR+ PA+AL
Sbjct: 359 TQFLAKDVYYISQLPSELQWGDVTGITAIAFVLALAATLYPSWRASRVNPAEAL 412