Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Pseudomonas stutzeri RCH2

 Score =  267 bits (682), Expect = 5e-76
 Identities = 153/412 (37%), Positives = 240/412 (58%), Gaps = 12/412 (2%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           +++G RY RA++ N F SFI+L ++ G+ LGV A+I+V SVMNG + ++  RILG VP  
Sbjct: 8   VFIGSRYTRAKRRNHFISFISLTSLIGLALGVLAMIMVLSVMNGFQREMSARILGMVPHA 67

Query: 67  TVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLS 126
           TV    PL DW   A +L+    + G+ P    + M+    +++ +Q+ G+ P+   ++S
Sbjct: 68  TVIGDQPLDDWQAVAARLSAHSQIVGMAPVTQLEGMLSFKGSMQPIQISGIDPQAEAQVS 127

Query: 127 AVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRK 186
            + +    G+  +L  G++ VI+G    R+  +  GD + L+  + V  +P G  P  ++
Sbjct: 128 ILGERLVGGSLDQLKPGEFGVIIGLMTVRRFGLKLGDKLTLIVPE-VSSTPGGVTPRMQR 186

Query: 187 FLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQIL 246
             V  VF++G+ +D  +  +H  DA ++ R   +++  +RL L+D + AP +A  V   L
Sbjct: 187 LNVVGVFKVGADLDGSLGMIHRADAAQIHRWAPEQVQGVRLKLSDLYRAPEVAAQVGATL 246

Query: 247 TAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTDV 306
              G      DW  T G LFSA+KMEK M+ L+L LIVAVAAFNI++ L+M+V DK  D+
Sbjct: 247 ---GDGYRVEDWSYTQGSLFSAMKMEKTMIGLLLMLIVAVAAFNIIATLIMVVADKRADI 303

Query: 307 AVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATL----GISILG 362
           A+L+T G     +M IF+VQG +    G  +G+V+G+L  LN++ L+  L    G  I  
Sbjct: 304 AILRTLGATPRQIMAIFMVQGSIIGFSGTVIGVVLGVLGALNVSELVNWLEKVSGQHIFS 363

Query: 363 AG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
           +       LP +L L  + L+ V  L ++ +ATLYPA RAA+ QPA ALRYE
Sbjct: 364 SDVYFISTLPSELRLEDVVLVSVAALSLSFLATLYPAWRAAQTQPAEALRYE 415