Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Pseudomonas stutzeri RCH2

 Score =  271 bits (693), Expect = 3e-77
 Identities = 151/413 (36%), Positives = 242/413 (58%), Gaps = 13/413 (3%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           +Y+G RY RAR+ + F SFI+L ++ G+ LGV  +IVV SVMNG + +++ R+LG VP  
Sbjct: 7   VYIGARYTRARRRSLFVSFISLTSMIGLALGVLVMIVVLSVMNGFDHEMRTRVLGMVPHA 66

Query: 67  TVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLS 126
           T+ +  P++DW     +L   P V    P + +Q ++     +  + +  V P+   ++S
Sbjct: 67  TIESPTPINDWQSLGARLEGHPQVSASAPFIQSQGLLTHQGQVTKILINAVDPKAERQVS 126

Query: 127 AVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRK 186
            + Q    G+  +L +G + +++G + A +L V  GD +  ++ + V  +P G  P  ++
Sbjct: 127 IIDQFFREGSLDDLAAGDFGIVIGDKAAAKLGVGVGDKITFVAPE-VTVTPAGMFPRMKR 185

Query: 187 FLVSAVFEMGS-QVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQI 245
           F V+ +F +G+ ++D  VA  +  D  RL R   D++  LRL  +D F AP +A ++   
Sbjct: 186 FTVTGIFHVGAGEIDGYVALANIADMARLQRWQPDQVQGLRLRFDDLFQAPRIAWELAGQ 245

Query: 246 LTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305
           L   G +  + DW  T+G+L+ A++MEK M+ L+L LIVAVAAFNI+S LVM+V DK  D
Sbjct: 246 L---GDDFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVTDKRGD 302

Query: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATL----GISIL 361
           +A+L+T G     +M IF+VQG +  V+G  +G ++G+   +N++  +A L    G   L
Sbjct: 303 IAILRTLGATPQQIMAIFMVQGTVIGVVGTLVGALLGMFAAVNVSSWIAALERLIGHKFL 362

Query: 362 GAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            A       LP +L    +  + V  LV++ +ATLYPA RAAR QPA ALRYE
Sbjct: 363 SADVYFIDYLPSQLMAADVIQVCVAALVLSFLATLYPAWRAARTQPAEALRYE 415