Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., Lipoprotein releasing system transmembrane protein LolC from Xanthomonas campestris pv. campestris strain 8004

 Score =  262 bits (670), Expect = 1e-74
 Identities = 156/415 (37%), Positives = 243/415 (58%), Gaps = 17/415 (4%)

Query: 6   PLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQ 65
           P+ +G RY RA++ N F SFI++ ++ GI LGV  LI   +VM+G + +++ R+L     
Sbjct: 9   PVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLLQMAAH 68

Query: 66  LTVYTK-APLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEK 124
            TV  + AP+ DW  A E  +  P + G  P + T++++Q      A+ V GV P    K
Sbjct: 69  ATVSAEGAPMQDWRHAVEVASADPRIAGAAPYIETESLLQGPRKQPAI-VRGVIPSEEAK 127

Query: 125 LSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQ 184
           +S +A+    G+   LT G Y +++G ELA  L V  GD++ +L  D    +PLG +P  
Sbjct: 128 VSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQA-TPLGAMPRL 186

Query: 185 RKFLVSAVFEMG-SQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQ 243
           ++F VS +FE G +++D G+A V+ +D  R++R   D +  +RL L+D   A  +A+D+ 
Sbjct: 187 KRFTVSGIFEAGYNEIDRGLAVVNMEDLARVLRM--DGVTGVRLRLHDMDQAFTVARDLA 244

Query: 244 QILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKT 303
             L         SDW     +L+ ++KMEK +M ++LSLIVA+ AFN+VS+ VM+V DK 
Sbjct: 245 LKLRGP---YRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTDKQ 301

Query: 304 TDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLM----ATLGIS 359
            D+A+L+T GL    VM +F+VQG L   +G  +G++ GI++TLNL  ++    A   + 
Sbjct: 302 ADIAILRTLGLSPGGVMQVFMVQGSLIGFMGTIMGVIGGIVLTLNLERILGAIEAVFSVK 361

Query: 360 ILGAGQM----LPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
           +L         LP  +    + +I V  LV++ +ATLYPA RA+R QPA ALRYE
Sbjct: 362 LLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 416