Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  270 bits (689), Expect = 8e-77
 Identities = 150/413 (36%), Positives = 243/413 (58%), Gaps = 12/413 (2%)

Query: 6   PLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQ 65
           P+++G RY RA++  +F SFI++ ++ G+ LGV A+IVV SVMNG + ++  RILG VP 
Sbjct: 6   PIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRILGMVPH 65

Query: 66  LTVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKL 125
             +    P+ DW   A+     P V    P    + M+    +++ +Q+ GV P L  ++
Sbjct: 66  AVIAGSTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDPALEHEV 125

Query: 126 SAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQR 185
           S V QH   G   +L  G++ V+LG   AR+ ++S GD + L+  + V  +P G  P  +
Sbjct: 126 SIVTQHITRGNLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPE-VSSAPGGITPRMQ 184

Query: 186 KFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQI 245
           +  V  +F++G+++D  +  ++  DA ++ R   +++  +RL L D + AP ++  +   
Sbjct: 185 RLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVSTAIAAG 244

Query: 246 LTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305
           L  +G  A   DW  T G LFSA+KMEK M+ L+L +IVAVAAFNI++ L+M+V DK  D
Sbjct: 245 L-GEGYRA--DDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKGAD 301

Query: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATL----GISIL 361
           +A+L+T G     +M IFVVQG +  ++G  +G ++GI+  LN++ L+  +    G  I 
Sbjct: 302 IAILRTIGATPRQIMAIFVVQGTVIGIVGTLIGGILGIIAALNVSSLVGWVERVSGQHIF 361

Query: 362 GAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            +       LP +L  G + LI     +++ +AT+YPA RAA++QPA ALRYE
Sbjct: 362 SSDVYFISNLPSELQAGDVLLICSAGFILSFLATIYPAWRAAQIQPAHALRYE 414