Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  259 bits (661), Expect = 1e-73
 Identities = 151/413 (36%), Positives = 236/413 (57%), Gaps = 12/413 (2%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           +++G RY RA++ N F SFI+L ++ G+ LGV  +IVV SVMNG + +++ R+LG VP  
Sbjct: 7   VFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHA 66

Query: 67  TVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLS 126
           T+ +  P++DW   A K+   P V  V P    Q ++     ++ V + G+ P    K+S
Sbjct: 67  TIESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDPLEERKVS 126

Query: 127 AVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRK 186
            +      G    L+ G + +++G + A +L V  GD +  ++ + V  +P G  P  ++
Sbjct: 127 IIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPE-VTVTPAGMFPRMKR 185

Query: 187 FLVSAVFEMGS-QVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQI 245
           F V+ +F +G+ ++D  +   +  D  RL R   +++  LRL  +D F AP  + ++ Q 
Sbjct: 186 FEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTSWEIAQK 245

Query: 246 LTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305
           L        + DW  T+G+L+ A++MEK M+ L+L LIVAVAAFNI+S LVM+V DK  D
Sbjct: 246 LGENNF--YSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGD 303

Query: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATL----GISIL 361
           +A+L+T G     +M IF+VQG +  V+G  +G  +GIL  LN++  +A L    G   L
Sbjct: 304 IAILRTLGATPRQIMAIFMVQGTVIGVVGTLIGAALGILAALNVSAAIAALEGLIGHKFL 363

Query: 362 GAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            A       LP +L    +  +    LV++ +ATLYPA RAAR QPA ALRYE
Sbjct: 364 NADVYFIDYLPSQLMAQDVFQVCGAALVLSFLATLYPAWRAARTQPAEALRYE 416