Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 417 a.a., Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI) from Rhodospirillum rubrum S1H

 Score =  216 bits (551), Expect = 8e-61
 Identities = 140/409 (34%), Positives = 220/409 (53%), Gaps = 14/409 (3%)

Query: 12  RYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQLTVYTK 71
           RY RAR+   F S I  F+++GI LGVA LI+V +VMNG    L  RI G    LTV  +
Sbjct: 13  RYLRARRKEGFVSVIAGFSLAGIGLGVATLIIVMAVMNGFREDLMGRIFGLNGHLTVLGQ 72

Query: 72  AP-LSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKLSAVAQ 130
              + D+  A + +  +PGV+ VTP+V  Q M+          V GV PE   +   +A 
Sbjct: 73  YDVMMDYDRATDIIRGIPGVRAVTPTVEGQVMLTDNGRSVGGLVRGVRPEDLRQRPMLAN 132

Query: 131 HTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQRKFLVS 190
              +G+  +L  GQ  +++G+ LA    +  GD + L+S  G V + +G VP  R + V 
Sbjct: 133 AVIAGSLDDLR-GQDSIMIGNRLAENFGLRVGDKLTLVSPKGKV-TAMGTVPRVRAYTVR 190

Query: 191 AVFEMG-SQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQILTAQ 249
            +F +G S+ D+   ++  + A+   + P++ +N L + ++ P     +A  +       
Sbjct: 191 VIFSIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGEVAGTIASTNGLG 250

Query: 250 GIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTDVAVL 309
           GI     DWR T    F+A+++E+N+M L+L+LI+ VAAFNI+S L+M+V DK  D+A+L
Sbjct: 251 GIRLR--DWRQTNATFFNALQVERNVMFLILTLIIVVAAFNIISGLIMLVKDKGRDIAIL 308

Query: 310 KTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNL----NGLMATLGISILGAG- 364
           +T G    A+M IF + G    V G   GL++G+L   N+     GL + LG+ +  A  
Sbjct: 309 RTMGASRGAIMRIFFLAGAAVGVTGTLAGLLLGVLFCQNIEAIRQGLQSLLGVELFNAEI 368

Query: 365 ---QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
                +P  +   ++  +++  L ++  ATLYPA RAAR  P  ALR E
Sbjct: 369 YFLATMPATMDPHEVMNVVLMALGLSFAATLYPAWRAARTDPVEALRNE 417