Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., lipoprotein-releasing ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score =  228 bits (582), Expect = 2e-64
 Identities = 141/416 (33%), Positives = 226/416 (54%), Gaps = 16/416 (3%)

Query: 5   FPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVP 64
           F   +  RY RAR+   F S I  F+  GI LGVA LI+V +VMNG   +L  +ILG   
Sbjct: 17  FEWLISGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILGLNG 76

Query: 65  QLTVYT-KAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAE 123
            L V   ++PL+DW   A++L+ + G++   P V  QA+  S  N   V V G+  +   
Sbjct: 77  HLLVQPLESPLTDWKDVADRLSGVQGIKLAAPVVDGQALASSPFNASGVFVRGIRADDLN 136

Query: 124 KLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPS 183
           +LS++A H   G        Q  V +G  LA QL +  GD++ L++  G V +P+G  P 
Sbjct: 137 RLSSIANHLKQGTLEGFDDSQ-GVAIGRRLADQLSLHAGDSITLVAPRGAV-TPMGTTPR 194

Query: 184 QRKFLVSAVFEMG-SQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDV 242
            + + V+AVFE+G S+ D+   ++  ++A+    + +D +  + +Y ++P       K V
Sbjct: 195 IKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRAND-VTAIEVYTDNPDRIDVFRKAV 253

Query: 243 QQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDK 302
            +   A G      DWR      F+A+++E+N+M L+L+LIV VAA NI+S L+M+V DK
Sbjct: 254 TE---AAGRPVFLVDWRQRNSTFFNALQVERNVMFLILTLIVLVAALNIISGLIMLVKDK 310

Query: 303 TTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLG----- 357
             D+A+L+T G    ++M +F++ G    V+G   G  VG+L+ +N+  +   L      
Sbjct: 311 GADIAILRTMGASQGSIMRVFLITGAAIGVVGTLTGFFVGVLVCMNIESIRQFLSWVTNT 370

Query: 358 ---ISILGAGQMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
                 L     LP ++   + S +++  L ++ +ATLYP+ RAAR+ P  ALRYE
Sbjct: 371 ELFSPELYFLSKLPAEIDFAETSAVVIMALTLSFLATLYPSWRAARLDPVDALRYE 426