Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 417 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  256 bits (653), Expect = 1e-72
 Identities = 155/417 (37%), Positives = 242/417 (58%), Gaps = 19/417 (4%)

Query: 4   RFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAV 63
           R   +VG+R++ AR++N F SFI+  + +GI LGVA LI V S MNG E +L+QR+LG V
Sbjct: 4   RLAFWVGWRFYMARQSNRFISFISFASTAGIALGVAVLITVLSAMNGFEKELEQRLLGVV 63

Query: 64  P--QLTVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPEL 121
           P  +LT   + PL DW   AE    +PG+    P V  Q ++Q     + + V G+ PEL
Sbjct: 64  PHGELTGVNE-PLHDWPKIAEDAKKIPGINASAPFVRIQGLIQKPGGFQGLTVIGITPEL 122

Query: 122 AEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSP---L 178
             K+S +       A+  L S +  ++LG  LA  L +S G+T+ L + +    S    L
Sbjct: 123 EAKVSNIRDFMPDAAWQALASKENNIVLGKGLADALGLSLGNTLSLYTPNLASQSTGRGL 182

Query: 179 GPVPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPAL 238
           G   S + F V+ +F +G ++D   AY+       L+    D ++ +R+ ++D F AP L
Sbjct: 183 GSAKSHQ-FKVAGIFALGGELDLTTAYISLDYGAELLGL-GDGVSGIRIKVDDVFAAPQL 240

Query: 239 AKDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMM 298
              ++ +  +Q      SDW  T GHL+  +++ + +M L+L+L++AVA FNIVS LVM 
Sbjct: 241 ---IRTLGYSQSQYMYLSDWTRTQGHLYQDIQLVRAVMYLVLALVIAVACFNIVSTLVMA 297

Query: 299 VVDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNL----NGLMA 354
           V DK +++A+L T G+  + +MGIFVVQG LN +LG  +G  +GI + LNL    +G+  
Sbjct: 298 VRDKQSEIAILLTMGMAKATIMGIFVVQGALNGLLGCLIGAGLGITLALNLSAIASGIEQ 357

Query: 355 TLGISILGAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATAL 407
             G+ +L A       LP +L L  ++L++   L+++L+ATLYPA +A+R+ PA AL
Sbjct: 358 LFGVQLLSADVYFIDFLPSQLHLLDVALVVSLALLMSLLATLYPAWKASRIHPAEAL 414