Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  537 bits (1383), Expect = e-157
 Identities = 280/411 (68%), Positives = 333/411 (81%), Gaps = 2/411 (0%)

Query: 1   MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
           M+L     +GYRYWRARKAN FASFITLFAVSGI LGVAALI+VSSVMNGLEGQLKQRIL
Sbjct: 1   MNLALSWTIGYRYWRARKANPFASFITLFAVSGILLGVAALIIVSSVMNGLEGQLKQRIL 60

Query: 61  GAVPQLTVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPE 120
           GAVPQLTV+ +  L  W   A  L     +  ++PSV+TQAM+QS +NI AVQV+G++PE
Sbjct: 61  GAVPQLTVHCEQHLGHWQDVANTLIDGKQILAMSPSVATQAMLQSPSNISAVQVYGIYPE 120

Query: 121 L-AEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179
           L  + LS + +H ++G+   L +G+Y++I+G+ELAR+L V PGD +R+LSGDGVVYSPLG
Sbjct: 121 LEKDNLSRLNRH-FNGSLDSLEAGKYRIIIGAELARRLDVKPGDKIRVLSGDGVVYSPLG 179

Query: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALA 239
           PVPSQRKF+V+ VFEMGSQVDA +AYVH++DA RLMR+  +EI  LRLYL DPF A  LA
Sbjct: 180 PVPSQRKFIVAGVFEMGSQVDASLAYVHHEDALRLMRKSPNEIKSLRLYLADPFKASKLA 239

Query: 240 KDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMV 299
             V+    A G   TTSDWR+ YGHLFSAVKMEKNMMSLMLSLI+AVAAFNIVSALVMMV
Sbjct: 240 SKVKAAFEAAGDSVTTSDWRENYGHLFSAVKMEKNMMSLMLSLIIAVAAFNIVSALVMMV 299

Query: 300 VDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGIS 359
           VDKTTDVAVLKTQGL T ++MGIF++QG LNAVLGL  GL +G+L TLN+N L + LGI 
Sbjct: 300 VDKTTDVAVLKTQGLTTGSIMGIFMIQGSLNAVLGLVGGLAIGVLATLNINTLFSMLGIH 359

Query: 360 ILGAGQMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
           +LGAGQ LPV+L  GQLSLI+VGTL +T +AT+YPALRAA VQPATALRYE
Sbjct: 360 VLGAGQRLPVQLEWGQLSLIVVGTLAITFLATVYPALRAASVQPATALRYE 410