Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 399 a.a., lipoprotein-releasing ABC transporter permease subunit LolC from Pantoea sp. MT58

 Score =  279 bits (714), Expect = 9e-80
 Identities = 164/405 (40%), Positives = 245/405 (60%), Gaps = 13/405 (3%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           L++G RY R R ++ F  F++  +  GI LGV A++ V SVMNG E +L+  ILG +PQ 
Sbjct: 7   LFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLAMVTVLSVMNGFERELEGNILGLMPQA 66

Query: 67  TVYT-KAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKL 125
            + + K  L+     A  L  L GV  + P  +   ++QS  ++    + G+ P+  + L
Sbjct: 67  LITSDKGSLNPQQQPAASLN-LQGVNRIAPLTTANVVLQSPRSVSVGVMLGINPDEKDPL 125

Query: 126 SAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQR 185
           +    +T     S L  GQY VILG +LA QL V  GD +RL+      ++P+G VPSQR
Sbjct: 126 TPFLVNTQQ---SVLQPGQYNVILGEQLASQLGVKRGDQLRLMVPSVSQFTPMGRVPSQR 182

Query: 186 KFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQQI 245
            F V+  +   S+VD     V+ QDA R+MR P+  I   RL+L+ P +  +L+   QQ 
Sbjct: 183 LFTVAGTYAANSEVDGYQILVNLQDASRVMRYPAGNITGWRLWLDKPLSVDSLS---QQT 239

Query: 246 LTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305
           L A  I     DWR+  G LF AV+MEKNMM L+LSLI+AVAAFNI+++L +++++K  +
Sbjct: 240 LPAGLI---WKDWRERKGDLFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLIMEKQGE 296

Query: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGISILGAGQ 365
           VA+L+TQGL    ++ +F+VQG    ++G  LG ++G+L+   LN LM  +G+ + GA  
Sbjct: 297 VAILQTQGLTRRQIVAVFMVQGASAGIIGTLLGTLLGVLLASQLNNLMPVIGLFLDGAA- 355

Query: 366 MLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            LPV + + Q+  I +  ++V L++TLYP+ RAA VQPA ALRYE
Sbjct: 356 -LPVDINVWQVVTIALSAMIVALLSTLYPSWRAAAVQPAEALRYE 399