Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., lipoprotein-releasing ABC transporter permease subunit from Dyella japonica UNC79MFTsu3.2

 Score =  248 bits (632), Expect = 3e-70
 Identities = 156/415 (37%), Positives = 236/415 (56%), Gaps = 18/415 (4%)

Query: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66
           L++G RY RA++ N F SFI+  ++  I + V ALI V SVMNG + +L+ RILGA+   
Sbjct: 7   LFIGLRYTRAKRRNQFISFISTVSIVCIAISVTALITVMSVMNGFDNELRTRILGAISHA 66

Query: 67  TVYTKA--PLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEK 124
           TV   A   + DW  A +     P V+G  P V  QA +Q+  +  A+ V G+ P    K
Sbjct: 67  TVSGLAGESVQDWQRAIQIAEANPHVRGAAPYVEAQAFLQARRSSGAL-VRGIDPAQEPK 125

Query: 125 LSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQ 184
           +S + +H   G    L  G++ ++LG ELA  L V+ GD V +   +    +P+G VP  
Sbjct: 126 VSDIDKHMIDGKLDALQPGKWNIVLGRELAMSLGVAMGDHVTMAVPEFRA-TPMGSVPRL 184

Query: 185 RKFLVSAVFEMGSQ-VDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAKDVQ 243
           R F V+ +FE+G Q  D+ +A V  QDA RL     D    +RL L+D F A  +AK++ 
Sbjct: 185 RSFTVAGIFELGMQEFDSNLALVSMQDAARL--NSIDGPTGIRLRLDDMFNARPVAKELA 242

Query: 244 QILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKT 303
             L   G       W D++ + FSA+ MEK +M ++LSLI+ VA  N++S L+M+V DK 
Sbjct: 243 NHL---GQVYRMDTWMDSHANFFSAISMEKKVMFIILSLIILVAVINLISMLMMLVTDKQ 299

Query: 304 TDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLM----ATLGIS 359
            D+A+L+T G    ++MG+F+VQG+L   +G+  G+ +G L++  L  ++     T   +
Sbjct: 300 ADIAILRTLGSTPRSIMGMFMVQGVLVGFVGIGFGVTLGSLLSWRLPQIVKWIERTFHTT 359

Query: 360 ILGAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410
            L         LP KL +  ++ + + T + +L+ATLYPA RA+R QPA ALRYE
Sbjct: 360 FLSPDVYYISELPSKLQMDDVAKVALVTFLFSLLATLYPAWRASRTQPAQALRYE 414