Pairwise Alignments

Query, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., lipoprotein-releasing ABC transporter permease subunit from Ralstonia sp. UNC404CL21Col

 Score =  247 bits (631), Expect = 4e-70
 Identities = 161/424 (37%), Positives = 240/424 (56%), Gaps = 22/424 (5%)

Query: 1   MDLRFPLYVGYRYWRARKA---NAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQ 57
           M L +   +G+RY RA K    N+F SFI+L ++ GI LGVAALI+V SVMNG + +++ 
Sbjct: 1   MKLPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 58  RILGAVPQLTVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGV 117
           R+L  +  + V     L DW   A +      V G  P V  QAM+     +R V + GV
Sbjct: 61  RMLSVLAHIEVMAPNSLPDWQRTANEAMQNKEVIGAAPYVGAQAMITRDEAVRGVLLRGV 120

Query: 118 FPELAEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSP 177
            P    K+S +A+   SG   +L  G++ + LGS+LA  L V  GD V L++  G + +P
Sbjct: 121 SPADEPKVSDIAKDFKSGTIDDLKPGEFGIALGSQLANGLGVHQGDKVTLVAPQGTI-TP 179

Query: 178 LGPVPSQRKFLVSAVFEMGS-QVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAP 236
            G +P  ++F V+ +FE G  + D+ +A V+ +DA+RL R   D    +RL L D   AP
Sbjct: 180 AGVLPRLKQFTVTGIFESGHYEFDSSLALVNMEDAERLFR--LDGPTGVRLKLVDMDRAP 237

Query: 237 ALAKDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALV 296
            +A+ + + L+    E    DW     + F+AVK EK MM ++L+LI+AVAAFN+VS LV
Sbjct: 238 QVAEALSRTLSG---ELYIRDWSRQNRNWFAAVKTEKKMMFIILTLIIAVAAFNLVSTLV 294

Query: 297 MMVVDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATL 356
           M V DK  D+A+L+T G + +++M IF+VQG+    +G  LG+  G LI  N++ ++   
Sbjct: 295 MTVTDKQADIAILRTMGAQPASIMKIFIVQGVAIGFIGTLLGVGFGTLIAYNIDVIVPF- 353

Query: 357 GISILGAGQMLPVKL----------ALGQLSLIIVGTLVVTLVATLYPALRAARVQPATA 406
            I  L   Q LP  +           +  ++ I V + ++  VATLYP+  A+RV PA A
Sbjct: 354 -IERLFHVQFLPRDIYFISELPSDPRVNDIATIGVISFILASVATLYPSWHASRVNPAEA 412

Query: 407 LRYE 410
           LRYE
Sbjct: 413 LRYE 416