Pairwise Alignments

Query, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  292 bits (747), Expect = 5e-83
 Identities = 177/451 (39%), Positives = 262/451 (58%), Gaps = 14/451 (3%)

Query: 297 LFSDVSER-KKAAQLIKYQANNDSLTGLANRNALFRQIQELINADSLTPGFSFMLMDLDN 355
           L  D  E  K+ +   +  A+ DSLTGL NR+   +++++ I  +  TP    + +D+DN
Sbjct: 237 LLQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNE--TP-LVMLYLDIDN 293

Query: 356 FKQVNDTYGHDKGDVLLVQMVEQVKICLDPQAVFARLGGDEFAILLPGVVTQRELSQLAD 415
           FK +ND+ GH  GD ++ ++  ++K  L  QAV   LGGDEF ++LP     R    LAD
Sbjct: 294 FKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLAD 353

Query: 416 KINKQVYRRYELSHDKGVYSSVSIGIARFPEDALDLEQLLNCADQAMYISKANGRNRYHF 475
           +I   + + ++L H     +  SIG  R+P D  D   LL  AD AMY +K  GRNR   
Sbjct: 354 RIISLINQPFDLHHFSKRLAC-SIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIK 412

Query: 476 FTEQMQQNAERIANLHTLLKQALEQNAFELYFQPIVDATTGLIVRAEVLLRWQHEGQ-FI 534
           F +QM + A     L   L++AL+QN  E+++QP V+A    I  AE L+RW+H  + +I
Sbjct: 413 FNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYI 472

Query: 535 SPDEFIPIAENSGLIVSIGRCVRQAVMQTIVEMQALG-WPMSLAINVSTFEFWSHELQDE 593
           SP  FIP+AE +GLI  +GR V + V  T+   +  G  P  +AIN+S  +F + +L   
Sbjct: 473 SPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQL--- 529

Query: 594 FCDSFTDIIEGLGVEDFPYELITLEITESLLMKKHAHLIQVLNELRARGIKISLDDFGTG 653
             D    ++   G++      IT E+TES +M    H  Q+LN ++  G  +S+DDFGTG
Sbjct: 530 -IDYLEKLLRTTGLDP---NNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTG 585

Query: 654 YSSLSYLANFPIDQIKIDKSFIDRLAEGERHLALIEAIVRLSHALNLRVTAEGVETQEQL 713
           YSSL+YLA FPID++KID++FI  +    + L +IE I+ L  +LNL V AEGVETQ+Q 
Sbjct: 586 YSSLAYLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQA 645

Query: 714 QVMMDNHIQEIQGYLFYKPIPKAVFFELLAK 744
            ++ + +   IQG+ FY+P PK    EL A+
Sbjct: 646 TLLSNLNCHSIQGFHFYRPQPKHEVEELFAQ 676