Pairwise Alignments

Query, 760 a.a., inter-alpha-trypsin inhibitor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 753 a.a., inter-alpha-trypsin inhibitor domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  424 bits (1091), Expect = e-123
 Identities = 287/772 (37%), Positives = 420/772 (54%), Gaps = 57/772 (7%)

Query: 1   MITKNRVKEVCEALAMLIISASICWFIPFAVLASPN-SVGALSEPQNITAVFDEHTASRL 59
           ++ K  +K+   ALAM+            A+LA+P  S  + S  Q +T   D   A + 
Sbjct: 13  VVPKVEMKQGLTALAMM------------ALLAAPTVSASSASTVQPVTLPLDGPMAGQG 60

Query: 60  PTFSYDDVTQGM---LVYQTANGNLMPSLPVDTQVSMRVSGLTNRVSVKQVFSNHTGFVL 116
            T   D +  G    L+++   G    SL +DT+ +++VS L +RV+V Q F N +  V+
Sbjct: 61  STSPGDIIAPGHGGELMFED-EGTEQVSLALDTRYTVKVSALVSRVTVSQTFQNQSNRVI 119

Query: 117 NGRYLFPLPNEAAVDSLRLHIGERVIEGQIHPKQAAQQIFEQAKAEGKRASLVSQERPNM 176
           NG Y F L   AAV  +RL IGER+IEG+I  K  A++++EQAK +GKRASLVS    N+
Sbjct: 120 NGHYRFALAPNAAVSGMRLTIGERLIEGEIQEKAHAERVYEQAKRDGKRASLVSHSESNL 179

Query: 177 FTTEVANLAPNEKLVVEISYQETIKYDDGVFSLRFPLVVAPRYIPGLTLGGE-------- 228
           F+T +AN  P E L V I YQE +    G   LR P    PRY     L           
Sbjct: 180 FSTRIANFMPGETLTVSIDYQEILHPQAGRVELRIPTAQTPRYGASAMLPSAQNRMQDEP 239

Query: 229 --SGQTGRVTSSQVFDADRIIAPIRGAPGEEDPVLKADIKVNLGLGVDKAAILSPYHAIT 286
             SG  G    + +  A       R     + P     +  ++  G   AA+ SP H + 
Sbjct: 240 WVSGVQG-AAQNHLHAAAPFWPATRAEAPADTPTPSLSLSASI-FGFAVAAVESPSHGLC 297

Query: 287 LDE-QQGGLTASLANRVRAERDFVLQWRLEQGVSPVAWVFNQNGKTHQTQAASDD---GS 342
               + GG   SL     A+RD VL W + +G  PVA    Q G ++     S +   G+
Sbjct: 298 EQGYRDGGWQLSLCPDTEADRDLVLSWVINEGSEPVADFLVQPGYSYPAAVESANTQYGT 357

Query: 343 MVNTAASTSASNID----NYS--LVMVLPPKVEASGQLNLPRELILVIDTSGSMAGDSII 396
             + A       +D    NYS  L+  +PP+   + +L   REL+LVIDTSGSMAGDS++
Sbjct: 358 AQDKAKQDEYVRVDFSQGNYSHGLLTFMPPQPNLANRL--ARELVLVIDTSGSMAGDSMV 415

Query: 397 QAKNALRYALRGLKAQDSFNIIEFNSDVSLLSPVPLPATAENLAIARQFVNRLQADGGTE 456
           QA++AL +AL GL  QDSFNII F+SD   L P   PATA NL  A+QFV  L+ADGGTE
Sbjct: 416 QARSALIHALGGLGPQDSFNIIAFSSDARPLWPDAKPATAFNLGAAQQFVRSLEADGGTE 475

Query: 457 MSLALEAALPKQRPSRAASENNVLQQVIFMTDGSVGNEEALFELIRHQIGDNRLFTVGIG 516
           M+ ALE AL  + PS    +   L+QV+F+TDG+V  E+ALF LI  ++G +RLF V IG
Sbjct: 476 MASALELAL--KTPSVVDEDTKRLRQVLFITDGAVNGEDALFNLIERRLGTSRLFPVAIG 533

Query: 517 SAPNSHFMQRAAELGRGTFTYIGDVDEVEQKINQLLTKIQYPVLTDLQVRFDDGTVPDYW 576
           +APN +FM RAA  GRG+FT+IG   EV +K+NQLL++I++PV++DL V + DG+  D  
Sbjct: 534 AAPNGYFMSRAAAAGRGSFTFIGHGGEVAEKMNQLLSRIEHPVVSDLSVTWADGSPVDAM 593

Query: 577 PSPIPDLYRGEPVLISIKHQPREPKELVISGRQGHKNWQQFVSLESTELNNAAAAVEQQV 636
           P  +PDLY GE + +S++  P     +++ G    + W++ ++  +              
Sbjct: 594 PGVLPDLYAGEALNLSLRTVPDALMPIIVKGNTDGQIWERKLTPRAVPGG---------- 643

Query: 637 AGLDLLWARKQIAALELSKNGANDDKVKQQVTALSMNYHLVSPYTSLVAVNLTPITTNAM 696
           +GLDL + + ++   +L +      + +    AL + YHLV+ +TSLVAV+ T + ++  
Sbjct: 644 SGLDLQYGKARVD--DLVRQTLTPSQRRAATVALGLEYHLVTAHTSLVAVDKTRV-SHGQ 700

Query: 697 SRDAVVRQHLPLGWQPFGVLPQTSTSSRFDMLLGGVVLMIALMLALFIRRQQ 748
             DA + +  P GWQ  G LPQT++ S   ML G ++++ A+  A + R  +
Sbjct: 701 GLDARLPEATPHGWQG-GRLPQTASGSLGLMLAGALLVLFAIAAATWRREDE 751