Pairwise Alignments

Query, 760 a.a., inter-alpha-trypsin inhibitor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 613 a.a., von Willebrand factor, type A (RefSeq) from Shewanella sp. ANA-3

 Score = 56.2 bits (134), Expect = 5e-12
 Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 18/242 (7%)

Query: 344 VNTAASTSASNIDNYSLVMVLPPKVEASGQLNLPRELILVIDTSGSMAG-DSIIQAKNAL 402
           V T  + S  N D   L + L    ++  +L     L+ ++D SGSMA  D +   + AL
Sbjct: 190 VTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASN-LVFLLDVSGSMASPDKLPLLQTAL 248

Query: 403 RYALRGLKAQDSFNIIEFNSDVSLLSPVPLPATAENLAIARQFVNRLQADGGTEMSLALE 462
           +   + L AQD  +I+ +     ++         + L  A   + +L A G T  +  ++
Sbjct: 249 KMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYA---LEQLSAGGSTNGAQGIQ 305

Query: 463 AALPKQRPSRAASENNVLQQVIFMTDG--SVG--NEEALFELI--RHQIGDNRLFTVGIG 516
            A   Q   +   E  +  +VI  TDG  +VG  N + L +L+  R Q G   L T+G G
Sbjct: 306 LAY--QLAQKHFVEGGI-NRVILATDGDFNVGTTNLDELIDLVSARKQQGIG-LTTLGFG 361

Query: 517 SAP-NSHFMQRAAELGRGTFTYIGDVDEVEQKINQLLTKIQYPVLTD--LQVRFDDGTVP 573
               N H M++ A+ G G + YI  ++E  + + + L+     +  +  +QV F+   V 
Sbjct: 362 MGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSATLLTIAKEVKVQVEFNPALVA 421

Query: 574 DY 575
           +Y
Sbjct: 422 EY 423