Pairwise Alignments

Query, 760 a.a., inter-alpha-trypsin inhibitor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 751 a.a., vault protein inter-alpha-trypsin subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 1222 bits (3163), Expect = 0.0
 Identities = 629/759 (82%), Positives = 681/759 (89%), Gaps = 9/759 (1%)

Query: 1   MITKNRVKEVCEALAMLIISASICWFIPFAVLASPNSVGALSEPQNITAVFDEHTASRLP 60
           MIT  RVKEVC+ LAML+I ASICW +PFAVLASPNSVG LS PQNI A FDEHTAS LP
Sbjct: 1   MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASILP 60

Query: 61  TFSYDDVTQGMLVYQTANGNLMPSLPVDTQVSMRVSGLTNRVSVKQVFSNHTGFVLNGRY 120
            FS+DDVTQGMLVYQTA+G LMPSLPVDTQVSM+VSGLTNRVSVKQVFSN TGFVLNGRY
Sbjct: 61  AFSFDDVTQGMLVYQTASGRLMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRY 120

Query: 121 LFPLPNEAAVDSLRLHIGERVIEGQIHPKQAAQQIFEQAKAEGKRASLVSQERPNMFTTE 180
           LFPLPNEAAVDSLRLHIGER+IEGQIHPKQ A+QIFEQAK+EGKRASLVSQERPNMFTTE
Sbjct: 121 LFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAKSEGKRASLVSQERPNMFTTE 180

Query: 181 VANLAPNEKLVVEISYQETIKYDDGVFSLRFPLVVAPRYIPGLTLGGESGQTGRVTSSQV 240
           VANLAP+E+LVVEISYQETI Y+DG+FSLRFPLVVAPRYIPGLTLGG +G+  RVTSSQV
Sbjct: 181 VANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNGE--RVTSSQV 238

Query: 241 FDADRIIAPIRGAPGEEDPVLKADIKVNLGLGVDKAAILSPYHAITLDEQQGGLTASLAN 300
           FDADRIIAPIR A  E DPVLKADIKV LG GVDK+A++SPYH IT+DE+QG LT +LAN
Sbjct: 239 FDADRIIAPIRDANSEADPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTVALAN 298

Query: 301 RVRAERDFVLQWRLEQGVSPVAWVFNQNGKTHQTQAASDDGSMVNTAASTSASNIDNYSL 360
           RV A RDFVLQWRL+QG SPV WVFNQ GKTH +Q   DD +  +T  +  +SN DNYSL
Sbjct: 299 RVPANRDFVLQWRLKQGTSPVGWVFNQAGKTHVSQ---DDNASADTGPTGKSSNTDNYSL 355

Query: 361 VMVLPPKVEASGQLNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGLKAQDSFNIIEF 420
           VMVLPPKVEAS QLNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGL+ QDSFNIIEF
Sbjct: 356 VMVLPPKVEASEQLNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGLRPQDSFNIIEF 415

Query: 421 NSDVSLLSPVPLPATAENLAIARQFVNRLQADGGTEMSLALEAALPKQRPSRAASENNVL 480
           NSDVSLLSP PLPATA NLA+ARQFVNRLQADGGTEM+ AL AALP+Q  + A++E+  L
Sbjct: 416 NSDVSLLSPTPLPATASNLAMARQFVNRLQADGGTEMAQALNAALPRQAFNAASAEDKSL 475

Query: 481 QQVIFMTDGSVGNEEALFELIRHQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGD 540
           +QVIFMTDGSVGNE ALFELIR+QIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGD
Sbjct: 476 RQVIFMTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGD 535

Query: 541 VDEVEQKINQLLTKIQYPVLTDLQVRFDDGTVPDYWPSPIPDLYRGEPVLISIKHQPREP 600
           VDEVEQKI+QLL KIQYPVLTDLQVRFDDG+VPDYWP+PIPDLYRGEPVLIS+K  PREP
Sbjct: 536 VDEVEQKISQLLAKIQYPVLTDLQVRFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREP 595

Query: 601 KELVISGRQGHKNWQQFVSLESTELNNAAAAVEQQVAGLDLLWARKQIAALELSKNGAND 660
           +ELVISGRQGHKNWQQ +SL++    N A  V Q  AGLDLLWARKQIAALELSKNGAND
Sbjct: 596 QELVISGRQGHKNWQQSLSLQA----NVATDVAQSSAGLDLLWARKQIAALELSKNGAND 651

Query: 661 DKVKQQVTALSMNYHLVSPYTSLVAVNLTPITTNAMSRDAVVRQHLPLGWQPFGVLPQTS 720
           DKVKQQVTALS+NYHLVSPYTSLVAV+LTPI +NAMSRDAVVRQHLPLGWQP GVLPQTS
Sbjct: 652 DKVKQQVTALSLNYHLVSPYTSLVAVDLTPIASNAMSRDAVVRQHLPLGWQPMGVLPQTS 711

Query: 721 TSSRFDMLLGGVVLMIALMLALFIRRQQRQQHLMMQALS 759
           TSSRFDMLLGG VL++ALMLAL IRRQQRQQ  +  AL+
Sbjct: 712 TSSRFDMLLGGSVLLLALMLALSIRRQQRQQRALSFALN 750