Pairwise Alignments

Query, 269 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 121 EQRAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLPQLDNVATVMKR 180
           EQR AE A     ++ +   +      L    +  F T S+EL+   + +LD +   + +
Sbjct: 180 EQRPAEPAPVAAPVEKVAVTKTFTFQHLD---SSTFATASAELKPATVQKLDKIVGYLNQ 236

Query: 181 SSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQALGAAMSLNEQ 240
             ++ +E+ G+ +  G    NQ LSE R   V   L  QG+  +R++ + LG +  +   
Sbjct: 237 YPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASN 296

Query: 241 LDSESDVSDRRVTLTIPPTQ 260
             +E    +RRV L IP  Q
Sbjct: 297 ATAEGREKNRRVELVIPEFQ 316