Pairwise Alignments

Query, 269 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., OmpA-OmpF porin, OOP family from Paraburkholderia bryophila 376MFSha3.1

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 116 KQLASEQ-RAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLPQLDNV 174
           +QLAS+   A     T K+   + A +Q LL +      ++F TGS+ L       LD +
Sbjct: 178 QQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGRAILDQM 237

Query: 175 ATVMKRSSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQALGAA 234
           A  M + +   + + G+ +  G+   N +LS+ R   V+ YL+ +G+ P +M+T  +G  
Sbjct: 238 AAAMLKMTTKTVAIIGHTDNSGNRTSNIALSQARADAVKGYLVAKGIPPQQMSTTGVGPD 297

Query: 235 MSLNEQLDSESDVSDRRV 252
             +     ++    +RR+
Sbjct: 298 QPIASNDSADGRARNRRI 315