Pairwise Alignments

Query, 269 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 217 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 30/206 (14%)

Query: 54  IGLGGGALLGALVGGPVGAVVGGITGTLIGQSVADTELVSVTLKNPQQHIAVQRQQVTSL 113
           +G G GA LGA+ GG  GA +G   G  +G          +T  N Q   A+  +     
Sbjct: 36  VGAGTGAALGAIFGGGKGAAIGAGVGAAVG---------GITGYNWQ---AIHNK----- 78

Query: 114 TVKQLASEQRAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLPQLDN 173
                         +   K     + EQ     +L +  +V F T S  ++  F P LD 
Sbjct: 79  -------------LSGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAVKPSFAPVLDQ 125

Query: 174 VATVMKRSSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQALGA 233
           +A  M+++ E   ++ G+ +  G    NQ+LS +R   V  YL Q+GVAP R++ Q LG 
Sbjct: 126 LAQTMQQNPELVAQVVGHTDSTGQPAYNQTLSVNRAESVTGYLGQRGVAPQRLSAQGLGQ 185

Query: 234 AMSLNEQLDSESDVSDRRVTLTIPPT 259
              + +        ++RRV + +  T
Sbjct: 186 TQPIADNNTEAGRAANRRVEIYLRAT 211