Pairwise Alignments

Query, 269 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 264 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  399 bits (1024), Expect = e-116
 Identities = 214/269 (79%), Positives = 236/269 (87%), Gaps = 5/269 (1%)

Query: 1   MMKKTLISVLVFSVFTASIATVSARVSLQNQPLLIEPQTEWTIEQEEDDGEALIGLGGGA 60
           MMKKTLI++LV SVF A IA+VSARVSLQNQP+L EPQTE  +EQ+EDDGEALIGLGGGA
Sbjct: 1   MMKKTLINILVLSVFAAPIASVSARVSLQNQPVLSEPQTEM-LEQDEDDGEALIGLGGGA 59

Query: 61  LLGALVGGPVGAVVGGITGTLIGQSVADTELVSVTLKNPQQHIAVQRQQVTSLTVKQLAS 120
           LLGALVGGPVGA++GG TGTLIGQSV+DT+    T+K  QQHIA+QRQQ+ S++ KQ AS
Sbjct: 60  LLGALVGGPVGAIIGGFTGTLIGQSVSDTD----TVKTQQQHIALQRQQLASISAKQQAS 115

Query: 121 EQRAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLPQLDNVATVMKR 180
           EQRAAEYASTQK LD LLAEQQQLLSELALGMNVQFRTGSSELE+ FLPQLDNVA VMKR
Sbjct: 116 EQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLPQLDNVAKVMKR 175

Query: 181 SSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQALGAAMSLNEQ 240
           SSESNLELKGYA+RRGD   NQ+LSE RLLEVR YLI+QGVAP R+TTQA GA M LN+Q
Sbjct: 176 SSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQAFGARMPLNDQ 235

Query: 241 LDSESDVSDRRVTLTIPPTQGLMASRVTE 269
            DSESDV DRRVTLT+ P QGLMASRVTE
Sbjct: 236 QDSESDVFDRRVTLTMQPNQGLMASRVTE 264