Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., phosphate regulon transcriptional regulatory protein PhoB from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 1e-32
 Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 8/232 (3%)

Query: 2   KRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDG 61
           +RI +VEDEA IRE    VL+Q GY      D  SAM       PDL ++D  L      
Sbjct: 3   RRILVVEDEAPIREMLCFVLEQKGYQAVEAEDYDSAMSKLAEPFPDLVLLDWMLPGGSGI 62

Query: 62  GFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFRR 121
             +       M+  +P++ LTAR  + D V GL +GADDY++K  S   L ARL A+ RR
Sbjct: 63  NLIKHMKREEMTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRR 122

Query: 122 SELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRHE 181
                + T  E++++   L +D    +V  N   +++  TEF M+H    H   V SR +
Sbjct: 123 ----VTPTALEDVIDVQGLKLDPVSHRVTANDQPLDMGPTEFKMLHFFMTHQERVYSREQ 178

Query: 182 LMQE---AKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDSLA 230
           L+       ++V+D T+  H++R+RK    A  +   I TV G GYR+ + A
Sbjct: 179 LLNNVWGTNVYVEDRTVDVHIRRLRKALEDAGHD-KLIQTVRGAGYRFSTKA 229