Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (300), Expect = 3e-32
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 12/231 (5%)

Query: 3   RIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEIDGG 62
           RI IVEDE AIRE    V++QHG++     D  SA+       PDL ++D         G
Sbjct: 4   RILIVEDELAIREMLTFVMEQHGFTTSVAEDFDSALGQLQEPYPDLILLDWMFPG--GSG 61

Query: 63  FMLCQSLRA--MSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFR 120
             L + L+    +  +P+I LTAR  + D V GL +GADDY++K  S   L AR+ A+ R
Sbjct: 62  IQLAKRLKQDEFTRQIPVIMLTARGEEEDKVKGLEVGADDYITKPFSPKELVARIKAVLR 121

Query: 121 RSELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRH 180
           R    A+ T  E  ++   LT+D    +V      +++  TEF ++H    HP  V SR 
Sbjct: 122 R----AAPTRLEETIDVQGLTLDPVSHRVTAGDTVLDMGPTEFRLLHFFMTHPERVYSRE 177

Query: 181 ELMQE---AKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDS 228
           +L+       ++V+D T+  H++R+RK    +  +   I TV G GYR+ +
Sbjct: 178 QLLDNVWGTNVYVEDRTVDVHIRRLRKAVEPSGHD-RLIQTVRGAGYRFST 227