Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., response regulator transcription factor from Rhodopseudomonas palustris CGA009

 Score =  170 bits (431), Expect = 2e-47
 Identities = 100/236 (42%), Positives = 142/236 (60%), Gaps = 10/236 (4%)

Query: 1   MKRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEID 60
           M  IA+V+D+  I  +    L+  GY + TY D  SA+  F T  PDLAI+DI +     
Sbjct: 1   MPTIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFRTTPPDLAILDIKMPRM-- 58

Query: 61  GGFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFR 120
            G    + LR  S+ LP+IFLT++D + D + GL++GADD++ K  S   L  R+ A+ R
Sbjct: 59  DGMETLRRLRQKSD-LPVIFLTSKDEEIDELFGLKMGADDFIRKPFSQRLLVERVKAVLR 117

Query: 121 RSELA-ASQTPQEN---LLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHV 176
           RS     +  P+EN    L+RGPL +D  R    W    + LTVTEF ++ ALA  PG V
Sbjct: 118 RSAPKDPAAAPKENDAKALDRGPLRMDPERHTCTWKNEPVTLTVTEFLILQALATRPGVV 177

Query: 177 RSRHELMQEA---KIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWDSL 229
           +SR+ LM  A   +++VDD TI SH+KR+RKKF A   EF+ I+T+YG+GYR+  +
Sbjct: 178 KSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKEI 233