Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., transcriptional regulatory protein ChvI from Phaeobacter inhibens DSM 17395

 Score =  182 bits (461), Expect = 6e-51
 Identities = 101/234 (43%), Positives = 147/234 (62%), Gaps = 10/234 (4%)

Query: 1   MKRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEID 60
           M +IA+V+D+  I  +    L+  G+ V+TY D  +A+ AFN +LPD+A++DI +     
Sbjct: 1   MSKIALVDDDRNILTSVSMTLEAEGFEVETYNDGQAALDAFNKKLPDMAVLDIKMPRM-- 58

Query: 61  GGFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFR 120
            G  L Q LR  +  +P+IFLT++D + D V GLR+GADDY+ K  S   L  R+ AL R
Sbjct: 59  DGMDLLQRLRQKTQ-MPVIFLTSKDDEIDEVLGLRMGADDYVKKPFSQRLLVERIRALLR 117

Query: 121 RSEL----AASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHV 176
           R E     A + T +  ++ERG L +D  R  V W    + LTVTEF ++ ALA+ PG V
Sbjct: 118 RQEAISGDAVATTTENKVMERGNLRMDPLRHSVSWKGQDVSLTVTEFLLLQALAQRPGFV 177

Query: 177 RSRHELMQEA---KIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYRWD 227
           +SR +LM  A   +++VDD TI SH+KR+RKK  +A  EF  I+T+YG+GYR++
Sbjct: 178 KSRDQLMDVAYDDQVYVDDRTIDSHIKRLRKKMRSADSEFSAIETLYGIGYRYN 231