Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 227 a.a., Two component sensory transduction protein RegX3 (transcriptional regulatory protein) (probably LuxR-family) from Mycobacterium tuberculosis H37Rv

 Score =  119 bits (299), Expect = 4e-32
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 1   MKRIAIVEDEAAIRENYKDVLQQHGYSVQTYADRPSAMLAFNTRLPDLAIIDIGLGNEID 60
           M  + IVEDE ++ +    +L++ G+      D P+A+  F+    D+ ++D+ L     
Sbjct: 1   MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGM-- 58

Query: 61  GGFMLCQSLRAMSNTLPIIFLTARDSDFDTVCGLRLGADDYLSKEVSFPHLTARLAALFR 120
            G  +C+ LRA S+ +P+I +TARDS+ D V GL LGADDY++K  S   L AR+ A+ R
Sbjct: 59  SGTDVCKQLRARSS-VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR 117

Query: 121 RSELAASQTPQENLLERGPLTIDANRMQVYWNQIAIELTVTEFWMVHALAKHPGHVRSRH 180
           R     S+   + +LE GP+ +D  R  V  N   I L + EF ++  L ++ G V +R 
Sbjct: 118 RGGDDDSEM-SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRG 176

Query: 181 ELMQE---AKIFVDDSTITSHVKRIRKKFMAAAPEFDCIDTVYGMGYR 225
           +L+     A    D  T+  HVKR+R K  A       + TV G+GY+
Sbjct: 177 QLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYK 224