Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 536 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 14/301 (4%)

Query: 394 ILTIMSMGT----LALFFFASSISNRIRKLRDEAENAIDSQGRVRNHLKPSKARDEIGDL 449
           +L I  MG     L ++     +  R+ +L  EA     +QG + + + P++  D +G +
Sbjct: 235 LLLIALMGLCLIGLVVYLLVRRLERRVLEL--EAAATQIAQGSLHSRV-PTEGSDSVGRV 291

Query: 450 SRSFASIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDTQKYVDRAQ 509
           + +F S+   L +       +   +SHELRTPVA +R  LE ++     +  +KY+    
Sbjct: 292 AAAFNSMAEHLQRSLMIQRELVRAVSHELRTPVARLRFGLEMVSDAATPEARRKYMRGMD 351

Query: 510 EGVSRLSMILNNMSEATRLEQSLTQADVTKFPLSQVVSGCMQGYQMTYPEQRFS----IK 565
             +  L  +++ M    RLEQ     +  +  L  ++   +        + R S    ++
Sbjct: 352 SDIQDLDKLVDEMLTYARLEQGAPTLNFQRVDLDALIDQVIAELAPLRADVRVSRGECLR 411

Query: 566 VPD-QPLMMQGVPEYIAQLMDKLIANAIEFCHQGSSIEVTLTQVGKQATLLISNLGPQLP 624
             + +   ++G P Y+ + +  L++NA+   H  + + ++     +Q  + + + GP +P
Sbjct: 412 AEEGEAAWVEGEPRYLHRAVQNLVSNALR--HADNEVRISYRLEAQQCRIDVDDDGPGVP 469

Query: 625 VDMSEQIFDSMVSVRDNQTQEKPHLGLGLYIARLVTEFHQGNILARNRSENDGVDILVTL 684
               +QIF   + + D++T+     GLGL I R +  +H+G  L  +     G    +T 
Sbjct: 470 EQAWDQIFTPFMRIDDSRTRASGGHGLGLSIVRRIIHWHEGRALIGHSVSLGGACFSLTW 529

Query: 685 P 685
           P
Sbjct: 530 P 530