Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 595 a.a., histidine kinase sensory transmembrane protein from Sinorhizobium meliloti 1021

 Score =  110 bits (275), Expect = 2e-28
 Identities = 90/364 (24%), Positives = 169/364 (46%), Gaps = 14/364 (3%)

Query: 327 NGS---HIQKALAGQQTSTWRLTPDNKAVVLAAASPIWIDNNVMGAVVAEETTHGIRTLR 383
           NGS    +  AL G + +  R+T   + +V + A P+     V+G ++       I  + 
Sbjct: 216 NGSIYPEVMNALTGVRGAVVRVTEKGELIV-SVAVPVQRFRAVLGVLLLSTQAGDIDKIV 274

Query: 384 NRALEKLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNHLKPSKAR 443
           +     +  V      +  +     +S+I+N +R+L   A        + R  +    +R
Sbjct: 275 HAERLAIIRVFGVAALVNVILSLLLSSTIANPLRRLSAAAIRVRRGGAKEREEIPDFSSR 334

Query: 444 -DEIGDLSRSFASIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDTQ 502
            DEIG+LS +   +   L      +EN ++ +SHEL+ P+  +RS++E L L   ++  +
Sbjct: 335 QDEIGNLSVALREMTTALYDRIAAIENFAADVSHELKNPLTSLRSAVETLPLARNEESKK 394

Query: 503 KYVDRAQEGVSRLSMILNNMSEATRLEQSLTQADVTKFPLSQVVSGCMQGYQMTYPEQR- 561
           + +D  Q  V RL  +++++S+A+RL+  L +AD  K  L +++   ++  +     ++ 
Sbjct: 395 RLMDVIQHDVRRLDRLISDISDASRLDAELARADAKKVDLEKLLGDLVEISRQIRGSKKP 454

Query: 562 ----FSIKVPDQP---LMMQGVPEYIAQLMDKLIANAIEFC-HQGSSIEVTLTQVGKQAT 613
               F +   D P    ++ G    I Q++  LI NA  F   Q   I V LT+   +  
Sbjct: 455 VLLDFVVDRKDNPRASFIVSGYELRIGQIITNLIENARSFVPEQNGRIVVRLTRSRLRCI 514

Query: 614 LLISNLGPQLPVDMSEQIFDSMVSVRDNQTQEKPHLGLGLYIARLVTEFHQGNILARNRS 673
           + + + GP +  +  ++IF+   + R        + GLGL I+R + E H G + A N +
Sbjct: 515 VYVEDNGPGIQAEDIDRIFERFYTDRPEGEDFGQNSGLGLSISRQIAEAHGGTLRAENIA 574

Query: 674 ENDG 677
             DG
Sbjct: 575 GKDG 578