Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 581 a.a., sensor histidine kinase from Rhodopseudomonas palustris CGA009

 Score =  112 bits (281), Expect = 4e-29
 Identities = 91/361 (25%), Positives = 176/361 (48%), Gaps = 21/361 (5%)

Query: 331 IQKALAGQQTSTWRLTPDNKAVVLAAASPIWIDNNVMGAVVAEETTHGIR---TLRNRAL 387
           + ++L GQ++S  R+  D   V+++ + P+     + G+++       I    T    A+
Sbjct: 213 VAQSLKGQKSSMVRIN-DRGEVIVSVSVPVQRFRAIYGSLMLSTQGDDIDQMVTAERLAI 271

Query: 388 EKLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNHLKP---SKARD 444
            K+F V   +M + ++ L   AS+I+  +R+L D AE     + R+R  ++    ++ RD
Sbjct: 272 LKVFGVAAVVMFVLSVLL---ASTIAGPVRRLADAAERV---RRRIRARVEIPDFTRRRD 325

Query: 445 EIGDLSRSFASIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDTQKY 504
           EIG LS +   +   L      +E  ++ +SHEL+ P+  +RS++E L L   D    + 
Sbjct: 326 EIGHLSGALRDMTDSLYNRIEAIERFAADVSHELKNPLTSLRSAVETLPLAKTDNSRARL 385

Query: 505 VDRAQEGVSRLSMILNNMSEATRLEQSLTQADVTKFPLSQVVSGCMQGYQMT------YP 558
           +   +  V RL  +++++S+A+RL+  L + D  +  L ++++        T        
Sbjct: 386 LSVIEHDVKRLDRLISDISDASRLDAELQRQDAAQVDLRRLLTTLTLVANETRLGHNALV 445

Query: 559 EQRFSIKVPDQPLMMQGVPEYIAQLMDKLIANAIEFCHQGSSIEVTLTQVGKQATLLISN 618
           E +F     DQ   + G    + Q++  L++NA  F  +G  + +   +   +  +++ +
Sbjct: 446 EVKFDGPAADQ-FPVPGHDSRLGQVISNLLSNAQSFSREGGKVRILCRRRKAEIEIIVED 504

Query: 619 LGPQLPVDMSEQIFDSMVSVRDNQTQEKPHLGLGLYIARLVTEFHQGNILARNRSENDGV 678
            GP +  D  E+IF+   + R +Q   + + GLGL I++ + E H G I A NR    G 
Sbjct: 505 EGPGIRDDALEKIFERFYTDRPHQGFGQ-NSGLGLSISKQIVEAHGGKIWAENRVGPRGE 563

Query: 679 D 679
           D
Sbjct: 564 D 564