Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 570 a.a., sensor protein ChvG from Phaeobacter inhibens DSM 17395

 Score =  125 bits (315), Expect = 4e-33
 Identities = 121/487 (24%), Positives = 217/487 (44%), Gaps = 42/487 (8%)

Query: 222 VGTSALDTVDKLGTVLVPSPEIENIIKGMSHYSSRIWVIDKHGRVLAKSGDIRDSNSVWT 281
           VGT +L     +G  + P   ++NI        + ++V D  G ++A++  +    ++  
Sbjct: 104 VGTVSL----AVGDGIDPVTTLQNI---SLRAGAEVFVFDTAGTLIAQTKGVEQGGALDL 156

Query: 282 RTLDDENSNGLWQRFQRDYLHPLYYK----ILTKPPKDFIDSLRDSTELNGSHIQKALAG 337
            T D+ ++  +      D L  L+      + +  P+     L D  +L G  +Q+ALAG
Sbjct: 157 LTDDNPSATLI-----SDGLAALWSAAGGLLKSDAPEPEAQPLED--QLRGM-VQQALAG 208

Query: 338 QQTSTWRLTPDNKAVVLAAASPIWIDNNVMGAVVAEETTHGIRTLRNRALEKLFNVILTI 397
             T    +   +   V +AA+PI      +G V     T  I  L     E++  + +  
Sbjct: 209 G-TEVKAVVDTSGGTVFSAATPILFQGQAIGVVTLASPTGEIDALVRGEQERVLQMFVVA 267

Query: 398 MSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNHLKPSKAR--------DEIGDL 449
           + +        AS+I+N +  L + AE   D   R     KP + R        DEIG L
Sbjct: 268 LVVSIGLSLVLASTIANPLADLAEAAELGRDGDSRKS---KPGRIRIPDLSARPDEIGRL 324

Query: 450 SRSFASIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDTQKYVDRAQ 509
           SR+   +V  L       E  ++ ++HE++ P+A ++S++  L +   +   +K +D  +
Sbjct: 325 SRALRGMVKALYNRIDSNEQFAADVAHEIKNPLASLQSAVGTLRMIKREDQREKLLDVIE 384

Query: 510 EGVSRLSMILNNMSEATRLEQSLTQADVTKFPLSQVVSGCMQ--GYQMTYPEQRFSIKVP 567
             V RL  +++++S A+RL+  L + D   F L  ++    Q  G         +   +P
Sbjct: 385 HDVRRLDRLVSDISNASRLDAELVKEDEESFDLLHMLGNLNQFLGEDARGKGIDYITDLP 444

Query: 568 DQPLMMQGVPEYIAQLMDKLIANAIEFCHQGSSIEVTLTQVGKQATLLISNLGPQLPVDM 627
             P+M+QG+   +AQ++  LI NA+ FC  G +I V   +   +  +++ + GP +P   
Sbjct: 445 KTPIMIQGLEARLAQVLVNLITNAVSFCEDGDAIRVWARRRDNRVLVVVEDTGPGIPDQA 504

Query: 628 SEQIFDSMVSVRDNQTQEKPHLGLGLYIARLVTEFHQGNILARN--------RSENDGVD 679
             ++F    S R  +     + GLGL I++ + E H G I A N         SE  G  
Sbjct: 505 LSKVFKRFYSQRPVE-HFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADITSEPLGAR 563

Query: 680 ILVTLPL 686
            +V LP+
Sbjct: 564 FVVGLPV 570